DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Db and Serpinb6b

DIOPT Version :9

Sequence 1:NP_610244.2 Gene:Spn42Db / 35599 FlyBaseID:FBgn0033112 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_035584.1 Gene:Serpinb6b / 20708 MGIID:894688 Length:377 Species:Mus musculus


Alignment Length:382 Identity:123/382 - (32%)
Similarity:187/382 - (48%) Gaps:39/382 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FALCLHDHLCRASAGLNIIYSPLSIHISAAMLRMGTSEGSATAKEMDEGLRF------GGLEAQQ 71
            |||.|...|...|: .|:::||:|:..:.||:.||..  ..||.:|.:.|..      ||.:..|
Mouse    11 FALNLLKTLGEDSS-RNVLFSPISVSSALAMVFMGAK--GTTASQMAQALSLDKCSGKGGRDVHQ 72

  Fly    72 VAESFGVVLKSYEQCQVLKMANGLYVMKGLQVDEQFGHILEQKFRSKPMEIDF--GSEQAASIIN 134
            ..:|............||:.||.|:..|...:...|.....:.:.::..|:||  .:||:...||
Mouse    73 GFQSLLTETNKTGTQYVLRTANRLFGEKTFDILASFKDSCRKFYEAEMEELDFKGATEQSRQHIN 137

  Fly   135 KWVESQTNNLIKDIIGPRVLTKDSRLCLVNGIHFKGEWSISFNEKETREEDF-FGSDRPTRVRMM 198
            .||..:|.:.|.:::....:..::.|.|||.|:|||.|...||:::|:|..| ...|....|:||
Mouse   138 AWVAKKTEDKITELLSSGSVNSNTPLVLVNAIYFKGNWEKQFNKEDTQEMPFNVTKDVVKPVQMM 202

  Fly   199 HVCENFFFAVLPMFEATALRMNYSACNLAMIILLPDEKSNLTSLEKKLS----------DISLEV 253
            .....|....:.......|.:.|....|.|||:||||...|:.:||:::          |     
Mouse   203 FQKSTFKMTYVEEISTNILLLPYVGNELNMIIMLPDEHIELSMVEKEITYKKFIEWTRLD----- 262

  Fly   254 VSSAMNLEKVDVKIPSFTAEFQQELSQVLMLMGMNRIF-SGQAELGGMLQSEESLFVSQIVHKAF 317
               .|..|:|:|.:|.|..|...::..||..:||...| .|.|:..| :.|:|.||:|:::||:|
Mouse   263 ---KMEEEEVEVFLPKFKLEENYDMKDVLCRLGMTDAFEEGMADFSG-IASKEGLFLSKVIHKSF 323

  Fly   318 IEINEVGTEAAAATAAVATFRSMPARQGPPKVFHANRPFFYAIK-DNTHGLLFAGHF 373
            :|:||.||||||||||...||.|      ...|.||.||.:.|: ..|.|::|.|.|
Mouse   324 VEVNEEGTEAAAATAANIGFRCM------VPYFCANHPFLFFIQHSRTSGIVFCGRF 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DbNP_610244.2 SERPIN 12..373 CDD:238101 122/380 (32%)
Serpinb6bNP_035584.1 serpin 1..377 CDD:393296 123/382 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.830

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