DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Db and srp-7

DIOPT Version :9

Sequence 1:NP_610244.2 Gene:Spn42Db / 35599 FlyBaseID:FBgn0033112 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_001122924.1 Gene:srp-7 / 179195 WormBaseID:WBGene00005648 Length:373 Species:Caenorhabditis elegans


Alignment Length:380 Identity:103/380 - (27%)
Similarity:179/380 - (47%) Gaps:31/380 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 EQFALCLHDH-------LCRASAGLNIIYSPLSIHISAAMLRMGTSEGSATAKEMDEGLRFGGLE 68
            |..||.|...       |.:.:...::.:|||||.::.:::.:...  ..|..::.|.|..|..:
 Worm     6 ENMALLLQSETDFGLGLLRQQNISESLAFSPLSIALALSLVHVAAK--GETRDQIREALVKGSTD 68

  Fly    69 AQ--QVAESFGVVLKSYEQCQVLKMANGLYVMKGLQVDEQFGHILEQKFRSKPMEIDFGSEQA-A 130
            .|  |...:....|.:.|:...:|:||.::...|.::.:.:...:::.:.:....:||.:::| |
 Worm    69 EQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATA 133

  Fly   131 SIINKWVESQTNNLIKDIIGPRVLTKDSRLCLVNGIHFKGEWSISFNEKETREEDFFGS-DRPTR 194
            ..||.:|...|.:.||.|||...:..|....|.|.::||.:|...|.:..|.:.:||.| |....
 Worm   134 EAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSADSKRE 198

  Fly   195 VRMMHV-------CENFFFAVLPMFEATALRMNYSACNLAMIILLPDEKSNLTSLEKKLSDISLE 252
            :..:|.       .||..|.|        |.:.|.....|:.|.||..:..||...|.|...:::
 Worm   199 IDFLHASSVSRDYAENDQFQV--------LSLPYKDNTFALTIFLPKTRFGLTESLKTLDSATIQ 255

  Fly   253 VVSSAMNLEKVDVKIPSFTAEFQQELSQVLMLMGMNRIFSGQAELGGMLQSEESLFVSQIVHKAF 317
            .:.|.::...|:|:||.:..|.:..|.:.|..:|:.:.|...|:||.|   .:.|:||::.|||.
 Worm   256 HLLSNVSSTSVNVQIPKWKIETKLGLEEALQSLGIKKAFDNDADLGNM---ADGLYVSKVTHKAL 317

  Fly   318 IEINEVGTEAAAATAAVATFRSMPARQGPPKVFHANRPFFYAIKDNTHGLLFAGH 372
            ||::|.||:|||||....:.:|.......||.|.|:.|||:.:..:.|.|....|
 Worm   318 IEVDEEGTKAAAATTVSISLKSAMFVMEEPKDFTADHPFFFVLSKDNHPLFVGLH 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DbNP_610244.2 SERPIN 12..373 CDD:238101 102/379 (27%)
srp-7NP_001122924.1 serpinL_nematode 14..372 CDD:381047 98/370 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.030

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