DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Db and Serpina3c

DIOPT Version :9

Sequence 1:NP_610244.2 Gene:Spn42Db / 35599 FlyBaseID:FBgn0033112 Length:388 Species:Drosophila melanogaster
Sequence 2:XP_011242304.1 Gene:Serpina3c / 16625 MGIID:102848 Length:436 Species:Mus musculus


Alignment Length:382 Identity:113/382 - (29%)
Similarity:188/382 - (49%) Gaps:41/382 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KDEEFAQGLE---------QFALCLHDHLCRASAGLNIIYSPLSIHISAAMLRMGTSEGSATAKE 57
            ||:|....|:         .||..|:..|...:...||::|||||..:.|::.:| ::|: |.:|
Mouse    53 KDKENGTQLDSLTLASINTDFAFSLYKKLALKNPDTNIVFSPLSISAALAIVSLG-AKGN-TLEE 115

  Fly    58 MDEGLRFGGLEAQQ--VAESFGVVLKSY----EQCQVLKMANGLYVMKGLQVDEQFGHILEQKFR 116
            :.|||.|...|..:  :.:.||.:|:..    ||.|: ...:.|:|.|.||:..:|.......::
Mouse   116 ILEGLNFNLTETPEADIHQGFGHLLQRLSHPGEQVQI-STGSALFVEKHLQILAEFQEKARALYQ 179

  Fly   117 SKPMEIDFGSE-QAASIINKWVESQTNNLIKDIIGPRVLTKDSRLCLVNGIHFKGEWSISFNEKE 180
            ::....||... :|..:||.:|.:||...||.:|..  |..|:.:.|||.|:|||:|.:.||.::
Mouse   180 AEAFTADFQQPLEATKLINDYVSNQTQRKIKGLISD--LDTDTLMVLVNYIYFKGKWKMPFNPRD 242

  Fly   181 TREEDFF-GSDRPTRVRMMHVCENFFFAVLPMF-----EATALRMNYSACNLAMIILLPDEKSNL 239
            |.|.:|: ...|..:|.||.:..    ...|.|     ..|.:.:.|.. |.:.:.:|||: ..:
Mouse   243 TFESEFYLDVKRSVKVPMMKIKT----LTTPYFRDEELSCTVVELKYKG-NASALFILPDQ-GRM 301

  Fly   240 TSLEKKLSDISLEVVSSAMNLEKV-DVKIPSFTAEFQQELSQVLMLMGMNRIFSGQAELGGMLQS 303
            ..:|..|...:|....:::...|: ::.:|.|:......|..:|..:|:..|||.||:|.|:..:
Mouse   302 QQVEASLQPETLRKWKNSLRPRKMGELYLPKFSISTDYSLKNILPELGIKEIFSKQADLSGITGT 366

  Fly   304 EESLFVSQIVHKAFIEINEVGTEAAAATAAVATFRSMPARQGPPKVFHANRPFFYAI 360
            :: |.|||:||||.:::.|.|||..|||.  ..||.:..|..    ...||.|...|
Mouse   367 KD-LIVSQMVHKAVLDVAETGTEGVAATG--VNFRILSRRTS----LWFNRTFLMVI 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DbNP_610244.2 SERPIN 12..373 CDD:238101 109/363 (30%)
Serpina3cXP_011242304.1 serpinA3_A1AC 56..434 CDD:381019 111/379 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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