DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn42Db and Serpinb7

DIOPT Version :9

Sequence 1:NP_610244.2 Gene:Spn42Db / 35599 FlyBaseID:FBgn0033112 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_081824.1 Gene:Serpinb7 / 116872 MGIID:2151053 Length:380 Species:Mus musculus


Alignment Length:381 Identity:111/381 - (29%)
Similarity:186/381 - (48%) Gaps:36/381 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 QFALCLHDHLCRASAGLNIIYSPLSIHISAAMLRMGTSEGSATAKEMDEGLRFG----------- 65
            :|...|...:..:....|:.:|.|||..:..::|:| :.|.. |:::|:.|.|.           
Mouse    10 EFGFDLFREMDSSQGNGNVFFSSLSIFTALTLIRLG-ARGDC-ARQIDKALHFNIPSRQGNSSNN 72

  Fly    66 --GLEAQ--QVAESFGVVLKSYEQCQVLKMANGLYVMKGLQVDEQFGHILEQKFRSKPMEIDFGS 126
              ||:.|  :|........|.||    |.:|.|::..|.....:.:....|..:.:|...:||.:
Mouse    73 QPGLQYQLKRVLADINSSHKDYE----LSIATGVFAEKVYDFHKNYIECAENLYNAKVERVDFTN 133

  Fly   127 --EQAASIINKWVESQTNNLIKDIIGPRVLTKDSRLCLVNGIHFKGEWSISFNEKETREEDFFGS 189
              :.....||||:|::|:..||.::|...|:..:.:.|||.::|||:|..:|.:.:|....|...
Mouse   134 DVQDTRFKINKWIENETHGKIKKVLGDSSLSSSAVMVLVNAVYFKGKWKSAFTKTDTLSCRFRSP 198

  Fly   190 DRPTR-VRMMHVCENFFFAVLPMFEATALRMNYSACNLAMIILLPDEKSNLTSLEKKLSDISLEV 253
            ..|.: |.|||....|..:.:.......|.:.|.. .::|.|:||::  .|..:|.|||..:|..
Mouse   199 TCPGKVVNMMHQERRFNLSTIQQPPMQVLELQYHG-GISMYIMLPED--GLCEIESKLSFQNLMD 260

  Fly   254 VSS--AMNLEKVDVKIPSFTAEFQQELSQVLMLMGMNRIF-SGQAELGGMLQSEESLFVSQIVHK 315
            .::  .|..:.|:|.:|.|..|...|::..|..:|:..|| ...|:|.| :.|...|:||:::||
Mouse   261 WTNRRKMKSQYVNVFLPQFKIEKNYEMTHHLKSLGLKDIFDESSADLSG-IASGGRLYVSKLMHK 324

  Fly   316 AFIEINEVGTEAAAATAAVATFRSMPARQGPPKVFHANRPFFYAIKDNTHGLLFAG 371
            :|||::|.||||.|||......:.:|    ...||.|:|||.:.||.|.. :||.|
Mouse   325 SFIEVSEEGTEATAATENNIVEKQLP----ESTVFRADRPFLFVIKKNDI-ILFTG 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DbNP_610244.2 SERPIN 12..373 CDD:238101 111/381 (29%)
Serpinb7NP_081824.1 SERPIN 4..380 CDD:294093 111/381 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.930

Return to query results.
Submit another query.