DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn42Db and LOC110439158

DIOPT Version :9

Sequence 1:NP_610244.2 Gene:Spn42Db / 35599 FlyBaseID:FBgn0033112 Length:388 Species:Drosophila melanogaster
Sequence 2:XP_021329696.1 Gene:LOC110439158 / 110439158 -ID:- Length:412 Species:Danio rerio


Alignment Length:382 Identity:103/382 - (26%)
Similarity:186/382 - (48%) Gaps:40/382 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FALCLHDHLCRAS--AGLNIIYSPLSIHISAAMLRMGTSEGSATAKEMDEGLRFGG--LEAQQVA 73
            ||..|:..|..:.  ...||.:||.::.::.:.|.:|.  |..|.:::..|:.:..  ...:::.
Zfish    43 FAFHLYKRLIESPDYQSKNIFFSPFTVSMALSKLTLGA--GGDTKQQLLSGIGYNSAIFSTEEMH 105

  Fly    74 ESFGVVLKSY-EQCQV-LKMANGLYVMKGLQVDEQFGHILEQKFRSKPMEIDFGSEQAASIINKW 136
            :.|..:|:.. .:..| :.:...||.....:...:|...:::.:.:....:||..::....|||:
Zfish   106 QLFHSLLEDIGNRTGVDIDIGTALYASDRFKPHSKFLEDMKEFYHTDGFTVDFRVKETVDQINKY 170

  Fly   137 VESQTNNLIKDIIGPRVLTKDSRLCLVNGIHFKGEWSISFNEKETREEDFFGSDRPT-RVRMMHV 200
            ||.:|:..|...:..  |.||:.:.|:..|:|||:|...||.::|.|..|...|:.| .|:|||.
Zfish   171 VEEKTHGKINQAVDD--LEKDTLMFLLTYIYFKGKWDKPFNPEKTCESTFHIDDKTTVPVQMMHQ 233

  Fly   201 CEN---FFFAVLPMFEATALRMNYSACNLAMIILLPDEKSNLTSLEKKLSDISLEVVSSAMNLE- 261
            .|.   ::.|.|.:   ..|.::|:. :.:|.:.:||......::|      .||:..|..::| 
Zfish   234 YEYLKVYYDAELSI---KVLCLDYND-SFSMFLAVPDVHMGRKTIE------DLEMTISRQHIEK 288

  Fly   262 --------KVDVKIPSFTAEFQQELSQVLMLMGMNRIFSGQAELGGMLQSEESLFVSQIVHKAFI 318
                    |||:.:|..:.:....|:.:|..|||..:||.:|:..|:  |||.:|:|::||||.:
Zfish   289 WKRSAFERKVDIYVPKLSLKTSYFLNDILKGMGMADMFSDKADFTGV--SEEKIFISKVVHKATL 351

  Fly   319 EINEVGTEAAAATAAVATFRSMPARQGPPKVFHANRPFFYAIKDNTH-GLLFAGHFI 374
            :|:|.||.|||.|  ...||.:  ...|......:|||...|.|.|: .:||.|..:
Zfish   352 DIDEKGTTAAAVT--TVQFRQL--SYSPLSTLSFDRPFMIFITDQTNDNILFFGKVV 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DbNP_610244.2 SERPIN 12..373 CDD:238101 103/379 (27%)
LOC110439158XP_021329696.1 alpha-1-antitrypsin_like 40..403 CDD:239011 103/379 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.020

Return to query results.
Submit another query.