DRSC/TRiP Functional Genomics Resources

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Protein Alignment coro and Coro7

DIOPT Version :10

Sequence 1:NP_001260743.1 Gene:coro / 35596 FlyBaseID:FBgn0265935 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_084481.3 Gene:Coro7 / 78885 MGIID:1926135 Length:922 Species:Mus musculus


Alignment Length:486 Identity:144/486 - (29%)
Similarity:237/486 - (48%) Gaps:57/486 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SSKFRHVYGQALKREQCYDNIR---VSKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPHNKVGR 69
            ||||||..|..|.|:....|::   ::.......|||...:....::.|  ||...||...|.||
Mouse   467 SSKFRHTQGSLLHRDSHITNLKGLNLTTPGESDGFCANRLRVAVPLLSS--GGQVAVLELQKPGR 529

  Fly    70 IAADHPLVGGHKG-PVLDIAWCPHNDNVIASGSEDCVVKVWQIPDGGLSRTLTEPVVDLVFHQRR 133
            : .|..|.....| .|:|:.|.|.:.:.:|...||..:::|::|.|||...||.|...|..|..:
Mouse   530 L-PDTALPTLQNGTAVMDLVWDPFDPHRLAVAGEDARIRLWRVPPGGLENVLTTPETVLTGHTEK 593

  Fly   134 VGLVLWHPSALNVLLTAGSDNQVVIWNVGTGEILVHIDSHPDIVYSACFNWDGSKLVTTCKDKKI 198
            :..:.:||.|.:||.::..|..|.||::.||...:.:..|.|.::|..::.||.:|.|.|||..:
Mouse   594 IYSLRFHPLAADVLASSSYDLTVRIWDLQTGAERLKLQGHQDQIFSLAWSPDGKQLATVCKDGHV 658

  Fly   199 RIYDPRTAELE-SEAMCHEGSKATRAIFL-RHGLIFTTGFNRSSERQYSLRAPDALNE-PIVMVE 260
            |:|:||::.|. .|....||.:..|.::: ..|.:..:||:..||||..|...|||.: |..::.
Mouse   659 RVYEPRSSPLPLQEGPGPEGGRGARIVWVCDGGCLLVSGFDSRSERQLQLYIADALAQGPSALLG 723

  Fly   261 LDTSNGVMFPLYDADTNMIYLCGKGDSVIRYFEVTPEPPFVHYINTFQTTEPQRGIGLMPKRGCD 325
            ||.:...:.|.||.||.::.|.||||:.:..:||.||.||....|:|.:.:|.:|..|:||..||
Mouse   724 LDVAPSTLLPSYDPDTGLVLLTGKGDTRVFLYEVLPEAPFFLECNSFTSPDPHKGFVLLPKTECD 788

  Fly   326 VTTCEVAKFYRMNNNGLCQVISMTVPR-KSDLFQEDLYPDT-LAEDAAITAEEWIDGKDADPITF 388
            :...|.|:..|:....| :.::..:|| :.:.||:|::||| :..:.|::|:.|.:|.:..|...
Mouse   789 IQDVEFARCLRLRQTSL-EPVAFRLPRVRKEFFQDDVFPDTAVTWEPALSAKAWFEGANGQPRLL 852

  Fly   389 SLKDRVSIVQGGYVSSSVNKSLPAKKAGNILNKPRGDSASSGATSSSAGGGNFASGNNNEASEGG 453
            ||:.     .|....|...:.:||::|.:                                    
Mouse   853 SLQP-----PGMTPVSQAPREVPARRAPS------------------------------------ 876

  Fly   454 PPAAVLSEKDLRTIQDEIRKLKAIIVKQENR 484
             .|..|.||..:..::|:  |.|::.|..||
Mouse   877 -SAQYLEEKSDQQKKEEL--LNAMVAKLGNR 904

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
coroNP_001260743.1 WD40 9..>392 CDD:475233 128/391 (33%)
WD40 repeat 37..78 CDD:293791 13/40 (33%)
WD40 repeat 85..129 CDD:293791 15/43 (35%)
WD40 repeat 134..171 CDD:293791 11/36 (31%)
WD40 repeat 178..213 CDD:293791 14/35 (40%)
WD40 repeat 220..260 CDD:293791 13/41 (32%)
WD40 repeat 267..308 CDD:293791 17/40 (43%)
Coro7NP_084481.3 WD40 6..>379 CDD:475233
WD40 repeat 42..73 CDD:293791
WD 1 75..115
WD40 repeat 81..124 CDD:293791
WD 2 124..163
WD40 repeat 129..165 CDD:293791
WD 3 166..205
WD40 repeat 172..208 CDD:293791
WD 4 209..253
WD40 repeat 215..256 CDD:293791
WD40 repeat 264..302 CDD:293791
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 419..467 144/486 (30%)
WD40 468..877 CDD:475233 133/454 (29%)
WD 5 539..581 13/41 (32%)
WD40 repeat 545..589 CDD:293791 15/43 (35%)
WD 6 589..629 12/39 (31%)
WD40 repeat 594..631 CDD:293791 11/36 (31%)
WD 7 632..671 15/38 (39%)
WD40 repeat 638..674 CDD:293791 14/35 (40%)
WD40 repeat 681..722 CDD:293791 13/40 (33%)
WD 8 725..765 17/39 (44%)
WD40 repeat 730..773 CDD:293791 18/42 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 858..922 15/86 (17%)
Blue background indicates that the domain is not in the aligned region.

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