Sequence 1: | NP_001260743.1 | Gene: | coro / 35596 | FlyBaseID: | FBgn0265935 | Length: | 535 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038945638.1 | Gene: | Coro1c / 501841 | RGDID: | 1564490 | Length: | 479 | Species: | Rattus norvegicus |
Alignment Length: | 493 | Identity: | 264/493 - (53%) |
---|---|---|---|
Similarity: | 342/493 - (69%) | Gaps: | 36/493 - (7%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 RVVRSSKFRHVYGQALKREQCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPHNKVG 68
Fly 69 RIAADHPLVGGHKGPVLDIAWCPHNDNVIASGSEDCVVKVWQIPDGGLSRTLTEPVVDLVFHQRR 133
Fly 134 VGLVLWHPSALNVLLTAGSDNQVVIWNVGTGEILVHIDS-HPDIVYSACFNWDGSKLVTTCKDKK 197
Fly 198 IRIYDPRTAELESE-AMCHEGSKATRAIFLRHGLIFTTGFNRSSERQYSLRAPDALNEPIVMVEL 261
Fly 262 DTSNGVMFPLYDADTNMIYLCGKGDSVIRYFEVTPEPPFVHYINTFQTTEPQRGIGLMPKRGCDV 326
Fly 327 TTCEVAKFYRMNNNGLCQVISMTVPRKSDLFQEDLYPDTLAEDAAITAEEWIDGKDADPITFSLK 391
Fly 392 DRVSIVQGGYVSSSVNKSLPAKKAGNILNKPRGDSASS-----GATSSSAGGGNFASGNNNEASE 451
Fly 452 GGPPAAVLSEKDLRTIQDEIRKLKAIIVKQENRIRALE 489 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
coro | NP_001260743.1 | DUF1899 | 7..64 | CDD:286094 | 40/56 (71%) |
WD40 repeat | 37..78 | CDD:293791 | 25/40 (63%) | ||
WD40 | 79..294 | CDD:295369 | 130/216 (60%) | ||
WD40 repeat | 85..129 | CDD:293791 | 33/43 (77%) | ||
WD40 repeat | 134..171 | CDD:293791 | 24/36 (67%) | ||
WD40 repeat | 178..213 | CDD:293791 | 14/35 (40%) | ||
WD40 repeat | 220..260 | CDD:293791 | 21/39 (54%) | ||
WD40 repeat | 267..308 | CDD:293791 | 28/40 (70%) | ||
WD40_4 | 343..385 | CDD:292916 | 28/41 (68%) | ||
Coro1c | XP_038945638.1 | WD40 | 13..>407 | CDD:421866 | 240/402 (60%) |
WD40 repeat | 41..83 | CDD:293791 | 26/41 (63%) | ||
WD40 repeat | 89..133 | CDD:293791 | 33/43 (77%) | ||
WD40 repeat | 138..175 | CDD:293791 | 24/36 (67%) | ||
WD40 repeat | 183..218 | CDD:293791 | 14/34 (41%) | ||
WD40 repeat | 226..265 | CDD:293791 | 21/38 (55%) | ||
WD40 repeat | 273..314 | CDD:293791 | 28/40 (70%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166348862 | |
Domainoid | 1 | 1.000 | 174 | 1.000 | Domainoid score | I3570 |
eggNOG | 1 | 0.900 | - | - | E1_COG1985 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H56537 | |
Inparanoid | 1 | 1.050 | 525 | 1.000 | Inparanoid score | I1194 |
OMA | 1 | 1.010 | - | - | QHG53996 | |
OrthoDB | 1 | 1.010 | - | - | D179930at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000390 | |
OrthoInspector | 1 | 1.000 | - | - | otm45663 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100479 | |
Panther | 1 | 1.100 | - | - | O | PTHR10856 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X216 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
16 | 15.770 |