Sequence 1: | NP_001260743.1 | Gene: | coro / 35596 | FlyBaseID: | FBgn0265935 | Length: | 535 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_062095.2 | Gene: | Coro1b / 29474 | RGDID: | 2382 | Length: | 484 | Species: | Rattus norvegicus |
Alignment Length: | 504 | Identity: | 272/504 - (53%) |
---|---|---|---|
Similarity: | 354/504 - (70%) | Gaps: | 27/504 - (5%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MSFR-VVRSSKFRHVYGQALKREQCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPH 64
Fly 65 NKVGRIAADHPLVGGHKGPVLDIAWCPHNDNVIASGSEDCVVKVWQIPDGGLSRTLTEPVVDLVF 129
Fly 130 HQRRVGLVLWHPSALNVLLTAGSDNQVVIWNVGTGEILVHIDS-HPDIVYSACFNWDGSKLVTTC 193
Fly 194 KDKKIRIYDPRTAELESE-AMCHEGSKATRAIFLRHGLIFTTGFNRSSERQYSLRAPDALNEPIV 257
Fly 258 MVELDTSNGVMFPLYDADTNMIYLCGKGDSVIRYFEVTPEPPFVHYINTFQTTEPQRGIGLMPKR 322
Fly 323 GCDVTTCEVAKFYRMNNNGLCQVISMTVPRKSDLFQEDLYPDTLAEDAAITAEEWIDGKDADPIT 387
Fly 388 FSLKDRVSIVQGGYVSSSVNKSLPAKKAGNIL--NKPRGDSASSGATSSSAGGGNFASGNNNEAS 450
Fly 451 EGGPPAAVLSEKDLRTIQDEIRKLKAIIVKQENRIRALEAKEDARNKNG 499 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
coro | NP_001260743.1 | DUF1899 | 7..64 | CDD:286094 | 41/56 (73%) |
WD40 repeat | 37..78 | CDD:293791 | 29/40 (73%) | ||
WD40 | 79..294 | CDD:295369 | 129/216 (60%) | ||
WD40 repeat | 85..129 | CDD:293791 | 33/43 (77%) | ||
WD40 repeat | 134..171 | CDD:293791 | 23/36 (64%) | ||
WD40 repeat | 178..213 | CDD:293791 | 16/35 (46%) | ||
WD40 repeat | 220..260 | CDD:293791 | 20/39 (51%) | ||
WD40 repeat | 267..308 | CDD:293791 | 24/40 (60%) | ||
WD40_4 | 343..385 | CDD:292916 | 28/41 (68%) | ||
Coro1b | NP_062095.2 | WD40 | 10..480 | CDD:421866 | 263/491 (54%) |
WD40 repeat | 38..80 | CDD:293791 | 30/41 (73%) | ||
WD 1 | 80..120 | 31/39 (79%) | |||
WD40 repeat | 86..130 | CDD:293791 | 33/43 (77%) | ||
WD 2 | 130..170 | 25/39 (64%) | |||
WD40 repeat | 135..172 | CDD:293791 | 23/36 (64%) | ||
WD 3 | 174..213 | 18/38 (47%) | |||
WD40 repeat | 180..215 | CDD:293791 | 16/34 (47%) | ||
WD 4 | 217..260 | 23/42 (55%) | |||
WD40 repeat | 223..263 | CDD:293791 | 20/39 (51%) | ||
WD 5 | 265..305 | 25/39 (64%) | |||
WD40 repeat | 270..311 | CDD:293791 | 24/40 (60%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166348860 | |
Domainoid | 1 | 1.000 | 174 | 1.000 | Domainoid score | I3570 |
eggNOG | 1 | 0.900 | - | - | E1_COG1985 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 525 | 1.000 | Inparanoid score | I1194 |
OMA | 1 | 1.010 | - | - | QHG53996 | |
OrthoDB | 1 | 1.010 | - | - | D179930at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000390 | |
OrthoInspector | 1 | 1.000 | - | - | otm45663 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100479 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR10856 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X216 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
14 | 13.770 |