| Sequence 1: | NP_001260743.1 | Gene: | coro / 35596 | FlyBaseID: | FBgn0265935 | Length: | 535 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_035909.2 | Gene: | Coro1c / 23790 | MGIID: | 1345964 | Length: | 474 | Species: | Mus musculus |
| Alignment Length: | 492 | Identity: | 265/492 - (53%) |
|---|---|---|---|
| Similarity: | 343/492 - (69%) | Gaps: | 34/492 - (6%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 4 RVVRSSKFRHVYGQALKREQCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPHNKVG 68
Fly 69 RIAADHPLVGGHKGPVLDIAWCPHNDNVIASGSEDCVVKVWQIPDGGLSRTLTEPVVDLVFHQRR 133
Fly 134 VGLVLWHPSALNVLLTAGSDNQVVIWNVGTGEILVHIDS-HPDIVYSACFNWDGSKLVTTCKDKK 197
Fly 198 IRIYDPRTAELESE-AMCHEGSKATRAIFLRHGLIFTTGFNRSSERQYSLRAPDALNEPIVMVEL 261
Fly 262 DTSNGVMFPLYDADTNMIYLCGKGDSVIRYFEVTPEPPFVHYINTFQTTEPQRGIGLMPKRGCDV 326
Fly 327 TTCEVAKFYRMNNNGLCQVISMTVPRKSDLFQEDLYPDTLAEDAAITAEEWIDGKDADPITFSLK 391
Fly 392 DRVSIVQGGYVSSSVNKSLPAKKAGNILNKPRGDSASSGATSSSAGGGNFASGNNNEAS----EG 452
Fly 453 GPPAAVLSEKDLRTIQDEIRKLKAIIVKQENRIRALE 489 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| coro | NP_001260743.1 | DUF1899 | 7..64 | CDD:286094 | 40/56 (71%) |
| WD40 repeat | 37..78 | CDD:293791 | 25/40 (63%) | ||
| WD40 | 79..294 | CDD:295369 | 130/216 (60%) | ||
| WD40 repeat | 85..129 | CDD:293791 | 33/43 (77%) | ||
| WD40 repeat | 134..171 | CDD:293791 | 24/36 (67%) | ||
| WD40 repeat | 178..213 | CDD:293791 | 14/35 (40%) | ||
| WD40 repeat | 220..260 | CDD:293791 | 21/39 (54%) | ||
| WD40 repeat | 267..308 | CDD:293791 | 28/40 (70%) | ||
| WD40_4 | 343..385 | CDD:292916 | 28/41 (68%) | ||
| Coro1c | NP_035909.2 | DUF1899 | 6..63 | CDD:286094 | 40/56 (71%) |
| PTZ00421 | 8..471 | CDD:173611 | 261/487 (54%) | ||
| WD40 repeat | 36..78 | CDD:293791 | 26/41 (63%) | ||
| WD40 | 75..300 | CDD:295369 | 134/224 (60%) | ||
| WD 1 | 78..118 | 31/39 (79%) | |||
| WD40 repeat | 84..128 | CDD:293791 | 33/43 (77%) | ||
| WD 2 | 128..168 | 26/39 (67%) | |||
| WD40 repeat | 133..170 | CDD:293791 | 24/36 (67%) | ||
| WD 3 | 172..202 | 11/29 (38%) | |||
| WD40 repeat | 178..213 | CDD:293791 | 14/34 (41%) | ||
| WD 4 | 215..249 | 20/33 (61%) | |||
| WD40 repeat | 221..260 | CDD:293791 | 21/38 (55%) | ||
| WD 5 | 263..303 | 28/39 (72%) | |||
| WD40 repeat | 268..309 | CDD:293791 | 28/40 (70%) | ||
| WD40_4 | 343..385 | CDD:292916 | 28/41 (68%) | ||
| Mt_ATP-synt_D | <429..>474 | CDD:283519 | 14/38 (37%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C167845452 | |
| Domainoid | 1 | 1.000 | 174 | 1.000 | Domainoid score | I3658 |
| eggNOG | 1 | 0.900 | - | - | E1_COG1985 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H56537 | |
| Inparanoid | 1 | 1.050 | 531 | 1.000 | Inparanoid score | I1199 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 1 | 1.010 | - | - | QHG53996 | |
| OrthoDB | 1 | 1.010 | - | - | D179930at33208 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0000390 | |
| OrthoInspector | 1 | 1.000 | - | - | otm43590 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_100479 | |
| Panther | 1 | 1.100 | - | - | O | PTHR10856 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R238 |
| SonicParanoid | 1 | 1.000 | - | - | X216 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 1 | 0.960 | - | - | ||
| 16 | 15.800 | |||||