| Sequence 1: | NP_001260743.1 | Gene: | coro / 35596 | FlyBaseID: | FBgn0265935 | Length: | 535 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001178568.1 | Gene: | Coro7 / 192276 | RGDID: | 621591 | Length: | 922 | Species: | Rattus norvegicus |
| Alignment Length: | 487 | Identity: | 146/487 - (29%) |
|---|---|---|---|
| Similarity: | 235/487 - (48%) | Gaps: | 59/487 - (12%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 8 SSKFRHVYGQALKREQCYDNIR---VSKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPHNKVGR 69
Fly 70 I--AADHPLVGGHKGPVLDIAWCPHNDNVIASGSEDCVVKVWQIPDGGLSRTLTEPVVDLVFHQR 132
Fly 133 RVGLVLWHPSALNVLLTAGSDNQVVIWNVGTGEILVHIDSHPDIVYSACFNWDGSKLVTTCKDKK 197
Fly 198 IRIYDPRTAELE-SEAMCHEGSKATRAIFL-RHGLIFTTGFNRSSERQYSLRAPDALNE-PIVMV 259
Fly 260 ELDTSNGVMFPLYDADTNMIYLCGKGDSVIRYFEVTPEPPFVHYINTFQTTEPQRGIGLMPKRGC 324
Fly 325 DVTTCEVAKFYRMNNNGLCQVISMTVPR-KSDLFQEDLYPDTLAEDA-AITAEEWIDGKDADPIT 387
Fly 388 FSLKDRVSIVQGGYVSSSVNKSLPAKKAGNILNKPRGDSASSGATSSSAGGGNFASGNNNEASEG 452
Fly 453 GPPAAVLSEKDLRTIQDEIRKLKAIIVKQENR 484 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| coro | NP_001260743.1 | DUF1899 | 7..64 | CDD:286094 | 18/58 (31%) |
| WD40 repeat | 37..78 | CDD:293791 | 13/42 (31%) | ||
| WD40 | 79..294 | CDD:295369 | 71/217 (33%) | ||
| WD40 repeat | 85..129 | CDD:293791 | 15/43 (35%) | ||
| WD40 repeat | 134..171 | CDD:293791 | 9/36 (25%) | ||
| WD40 repeat | 178..213 | CDD:293791 | 14/35 (40%) | ||
| WD40 repeat | 220..260 | CDD:293791 | 14/41 (34%) | ||
| WD40 repeat | 267..308 | CDD:293791 | 17/40 (43%) | ||
| WD40_4 | 343..385 | CDD:292916 | 13/43 (30%) | ||
| Coro7 | NP_001178568.1 | WD40 | 7..426 | CDD:421866 | |
| WD 1 | 75..115 | ||||
| WD40 repeat | 81..124 | CDD:293791 | |||
| WD 2 | 124..163 | ||||
| WD40 repeat | 129..165 | CDD:293791 | |||
| WD 3 | 166..205 | ||||
| WD40 repeat | 172..208 | CDD:293791 | |||
| WD 4 | 209..253 | ||||
| WD40 repeat | 215..256 | CDD:293791 | |||
| WD40 repeat | 264..302 | CDD:293791 | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 386..462 | ||||
| WD40 | 468..870 | CDD:421866 | 130/411 (32%) | ||
| WD 5 | 539..579 | 13/41 (32%) | |||
| WD40 repeat | 542..588 | CDD:293791 | 15/45 (33%) | ||
| WD 6 | 589..629 | 10/39 (26%) | |||
| WD40 repeat | 595..631 | CDD:293791 | 9/35 (26%) | ||
| WD 7 | 632..671 | 16/38 (42%) | |||
| WD40 repeat | 637..674 | CDD:293791 | 14/36 (39%) | ||
| WD 8 | 725..765 | 17/39 (44%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 854..922 | 18/95 (19%) | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C166348866 | |
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D179930at33208 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 2.850 | |||||