Sequence 1: | NP_001260743.1 | Gene: | coro / 35596 | FlyBaseID: | FBgn0265935 | Length: | 535 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001263735.1 | Gene: | pod-1 / 176784 | WormBaseID: | WBGene00004075 | Length: | 1136 | Species: | Caenorhabditis elegans |
Alignment Length: | 555 | Identity: | 140/555 - (25%) |
---|---|---|---|
Similarity: | 255/555 - (45%) | Gaps: | 52/555 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 SSKFRHVYG-QALKREQCYDNIRVSKSSW---DSTFCAVNPKFLAIIVESAGGGAFIVLPHNKVG 68
Fly 69 RIAADHPLVG-GHKGPVLDIAWCPHNDNVIASGSEDCVVKVWQIPDGGLSRTLTEPVVDLVFHQR 132
Fly 133 RVGLVLWHPSALNVLLTAGSDNQVVIWNVGTGEILVHIDSHPDIVYSACFNWDGSKLVTTCKDKK 197
Fly 198 IRIYDPRTAE---LESEAMCHEGSKATRAIF-LRHGLIFTTGFNRSSERQ---YSLRAPDALNEP 255
Fly 256 IVMVELDTSNGVMFPLYDADTNMIYLCGKGDSVIRYFEVTPEPPFVHYINTFQTTEPQRGIGLMP 320
Fly 321 KRGCDVTTCEVAKFYRMNNNGLCQVISMTVPR-KSDLFQEDLYPDTLAE-DAAITAEEWIDGKDA 383
Fly 384 DPITFSLKDRVSIVQGGYVSSSVNKSLPAKKAGNILNKPRGDSASSGAT---SSSAGGGNFASGN 445
Fly 446 NNEASEGGPPAAV-------LSEKDLRTIQDEIRKLKAIIVKQENRIRALEAKEDARNKNGSDAA 503
Fly 504 PASAGAATSDGKASESANDHA---STSAGTSKDED 535 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
coro | NP_001260743.1 | DUF1899 | 7..64 | CDD:286094 | 20/59 (34%) |
WD40 repeat | 37..78 | CDD:293791 | 12/40 (30%) | ||
WD40 | 79..294 | CDD:295369 | 53/221 (24%) | ||
WD40 repeat | 85..129 | CDD:293791 | 10/43 (23%) | ||
WD40 repeat | 134..171 | CDD:293791 | 9/36 (25%) | ||
WD40 repeat | 178..213 | CDD:293791 | 7/37 (19%) | ||
WD40 repeat | 220..260 | CDD:293791 | 11/43 (26%) | ||
WD40 repeat | 267..308 | CDD:293791 | 14/40 (35%) | ||
WD40_4 | 343..385 | CDD:292916 | 17/43 (40%) | ||
pod-1 | NP_001263735.1 | DUF1899 | 7..106 | CDD:286094 | |
WD40 | 138..>277 | CDD:295369 | |||
WD40 repeat | 175..211 | CDD:293791 | |||
WD40 repeat | 218..255 | CDD:293791 | |||
WD40 repeat | 261..302 | CDD:293791 | |||
WD40 repeat | 309..350 | CDD:293791 | |||
WD40_4 | 384..427 | CDD:292916 | |||
DUF1899 | 598..652 | CDD:286094 | 20/56 (36%) | ||
PTZ00421 | 599..1029 | CDD:173611 | 120/446 (27%) | ||
WD40 repeat | 676..720 | CDD:293791 | 10/43 (23%) | ||
WD40 | 716..>791 | CDD:295369 | 14/74 (19%) | ||
WD40 repeat | 725..762 | CDD:293791 | 9/36 (25%) | ||
WD40 repeat | 769..809 | CDD:293791 | 7/40 (18%) | ||
WD40 repeat | 816..855 | CDD:293791 | 9/40 (23%) | ||
WD40 repeat | 863..903 | CDD:293791 | 14/39 (36%) | ||
WD40_4 | 937..981 | CDD:292916 | 18/44 (41%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D179930at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |