| Sequence 1: | NP_001260743.1 | Gene: | coro / 35596 | FlyBaseID: | FBgn0265935 | Length: | 535 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_002932508.2 | Gene: | coro7 / 100492934 | XenbaseID: | XB-GENE-949602 | Length: | 907 | Species: | Xenopus tropicalis |
| Alignment Length: | 489 | Identity: | 163/489 - (33%) |
|---|---|---|---|
| Similarity: | 251/489 - (51%) | Gaps: | 64/489 - (13%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 8 SSKFRHVYGQALKREQCYDNIR-VSKSSWDST--FCAVNPKFLAIIVESAGGGAFIVLPHNKVGR 69
Fly 70 IAADHPLVGGHKGPVLDIAWCPHNDNVIASGSEDCVVKVWQIPDGGLSRTLTEPVVDLVFHQRRV 134
Fly 135 GLVLWHPSALNVLLTAGSDNQVVIWNVGTGEILVHIDSHPDIVYSACFNWDGSKLVTTCKDKKIR 199
Fly 200 IYDPRTAELE-SEAMCHEGSKATRAIFLRHG-LIFTTGFNRSSERQYSLRAPDALN-EPIVMVEL 261
Fly 262 DTSNGVMFPLYDADTNMIYLCGKGDSVIRYFEVTPEPPFVHYINTFQTTEPQRGIGLMPKRGCDV 326
Fly 327 TTCEVAKFYRMNNNGLCQVISMTVPR-KSDLFQEDLYPDT-LAEDAAITAEEWIDGKDADPITFS 389
Fly 390 LKDRVSIVQGGYVS-SSVNKSLPAKKAGNILNKPRGDSASSGATSSSAGGGNFASGNNNEASEGG 453
Fly 454 PPAAVLSEKDLRTIQDEIRK---LKAIIVKQENR 484 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| coro | NP_001260743.1 | DUF1899 | 7..64 | CDD:286094 | 21/58 (36%) |
| WD40 repeat | 37..78 | CDD:293791 | 13/42 (31%) | ||
| WD40 | 79..294 | CDD:295369 | 83/217 (38%) | ||
| WD40 repeat | 85..129 | CDD:293791 | 20/43 (47%) | ||
| WD40 repeat | 134..171 | CDD:293791 | 12/36 (33%) | ||
| WD40 repeat | 178..213 | CDD:293791 | 15/35 (43%) | ||
| WD40 repeat | 220..260 | CDD:293791 | 13/41 (32%) | ||
| WD40 repeat | 267..308 | CDD:293791 | 18/40 (45%) | ||
| WD40_4 | 343..385 | CDD:292916 | 17/43 (40%) | ||
| coro7 | XP_002932508.2 | DUF1899 | 3..61 | CDD:370206 | |
| WD40 | 80..419 | CDD:392136 | |||
| WD40 repeat | 81..122 | CDD:293791 | |||
| WD40 repeat | 127..163 | CDD:293791 | |||
| WD40 repeat | 170..206 | CDD:293791 | |||
| WD40 repeat | 213..254 | CDD:293791 | |||
| WD40 repeat | 261..300 | CDD:293791 | |||
| WD40 | 454..871 | CDD:392136 | 154/468 (33%) | ||
| WD40 repeat | 530..574 | CDD:293791 | 20/43 (47%) | ||
| WD40 repeat | 579..616 | CDD:293791 | 12/36 (33%) | ||
| WD40 repeat | 623..659 | CDD:293791 | 15/35 (43%) | ||
| WD40 repeat | 666..710 | CDD:293791 | 13/43 (30%) | ||
| WD40 repeat | 719..756 | CDD:293791 | 17/36 (47%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D179930at33208 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.920 | |||||