DRSC/TRiP Functional Genomics Resources

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Protein Alignment koi and MPS3

DIOPT Version :10

Sequence 1:NP_001260738.1 Gene:koi / 35594 FlyBaseID:FBgn0265003 Length:965 Species:Drosophila melanogaster
Sequence 2:NP_012515.4 Gene:MPS3 / 853434 SGDID:S000003556 Length:682 Species:Saccharomyces cerevisiae


Alignment Length:530 Identity:99/530 - (18%)
Similarity:209/530 - (39%) Gaps:162/530 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   503 LELQSSGGWQDGAKLSQANLEEITKLIKAEVHLHESHYTIQLDRI------DFASLLERILAAPA 561
            ||..|||......| |.:||::....:.:|:...:..::.:||:.      .|...::|:|.: .
Yeast   180 LESHSSGATSSPGK-SFSNLQKQVNHLYSELSKRDEKHSSELDKTVKIIVSQFEKNIKRLLPS-N 242

  Fly   562 LADFVDARISLRVGELEPKESSGSSDAEVQIERLNREIAFIKLALSDKQAENADLHQ-SISNLKL 625
            |.:|                       |..|..|.:::..|..::|:.|..|   |: ::.|:..
Yeast   243 LVNF-----------------------ENDINSLTKQVETISTSMSELQRRN---HKFTVENVTQ 281

  Fly   626 GQEDLLERIQQHELSQD-----RRFHGLL--AEIENKLSALNDSQFALLNKQIKLSLVEILGFKQ 683
            .|:.|::::..| |.|:     .....||  .|:.|.||||               :.:::   :
Yeast   282 WQDQLVKQLDTH-LPQEIPVVINNSSSLLIIPELHNYLSAL---------------ISDVI---E 327

  Fly   684 STAGGSAGQLD---DFDLQTWVRSM------FVAKDYLEQQLLELNKRTNNNIRDEIERSSILLM 739
            |...|:||..:   ::||..:|:.:      ::.|||..|   |:|:|..:|.::        :.
Yeast   328 SPGIGTAGSAESRWEYDLNRYVKEILSNELQYIDKDYFIQ---EMNRRLQSNKQE--------IW 381

  Fly   740 SDISQRLKREILLVVEAKHNESTKALKGHIREEEVRQIVKTVL-AIYDADK---TGLVDFALESA 800
            .:|:.||:.:     :.:..:..:....::.::....::|.:: .||::::   ...:|||....
Yeast   382 EEITNRLETQ-----QQQQQQQVQQDYSNVPQQYSSILMKRLIHQIYNSNQHQWEDDLDFATYVQ 441

  Fly   801 GGQILSTRCTESYQ-----------TKSAQISVFGIPLWYPTNTPRVAISPNVQPGECWAFQGFP 854
            |.::|:...:.:::           |.|.|.|   ...|...|          :||..||     
Yeast   442 GTKLLNHLTSPTWRQGSGVQPIELLTDSKQSS---STYWQCEN----------EPGCSWA----- 488

  Fly   855 GFLVLKLNSLVYVTGFTLEHIPKSLSPTGR-------IESAPRNFTVW-GLEQEKDQEPVL---- 907
                ::..:.:|:|..:..|        ||       :.||||..::: .|.|.|:.:.:.    
Yeast   489 ----IRFKTPLYLTKISYMH--------GRFTNNLHIMNSAPRLISLYVKLSQTKEIKALQTLAN 541

  Fly   908 ---FGDYQFEDNG----ASLQYFAVQN------------LDIKRPYEIVELRIETNHGHPTYTCL 953
               ||.:...|..    |..:|....:            :.:|.....:..:::.|:|:..:..|
Yeast   542 QYGFGQHHKRDRNYIKIAKFEYRLTDSRIRQQMYLPPWFIQLKPLVRSIVFQVDENYGNKKFISL 606

  Fly   954 YRFRVHGKPP 963
            .:|.::|..|
Yeast   607 RKFIINGVTP 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
koiNP_001260738.1 PRK03918 <462..>653 CDD:235175 34/163 (21%)
Sad1_UNC 827..962 CDD:400199 29/165 (18%)
MPS3NP_012515.4 Sad1_UNC 478..615 CDD:474037 28/163 (17%)

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