DRSC/TRiP Functional Genomics Resources

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Protein Alignment koi and SUN1

DIOPT Version :9

Sequence 1:NP_001260738.1 Gene:koi / 35594 FlyBaseID:FBgn0265003 Length:965 Species:Drosophila melanogaster
Sequence 2:NP_196118.1 Gene:SUN1 / 830381 AraportID:AT5G04990 Length:471 Species:Arabidopsis thaliana


Alignment Length:399 Identity:102/399 - (25%)
Similarity:163/399 - (40%) Gaps:95/399 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   580 KESSGSSDAEVQIERLNREIAFIKLALSDKQAENADLHQSISNLKLGQEDLLERIQQHELSQDRR 644
            |.||.||    .|.....|:||  ..|..:.||...|.::.:|....|.:||::..:.|....|:
plant   134 KASSPSS----PISSYETEMAF--SGLESRIAEVDGLVKATTNSMQVQVELLDKKMEREAKVLRQ 192

  Fly   645 FHGLLAEIENKLSALNDSQFALLNKQIKLSLVEILGFKQSTAGGSAGQLDDFDLQTWVRSMFVAK 709
                  |||.|.||.          |.:|..:|      |........:|:.:.:.|     |.|
plant   193 ------EIERKASAF----------QSELKKIE------SRTESLEKSVDEVNAKPW-----VTK 230

  Fly   710 DYLEQQLLELNKRTNNNIRDEIERSSILLMSDISQRLKREILLVVEAKHNESTKALKGHIREEEV 774
            |.||:...||.|   .|:.|.       ..|:||               .:..:|....|.|:|:
plant   231 DELERIYEELKK---GNVDDS-------AFSEIS---------------IDELRAYARDIMEKEI 270

  Fly   775 RQIVKTVLAIYDADKTGLVDFALESAGGQILSTRCTESYQTKSAQISVFGIPLWYPTNTPRV--- 836
            .:        :.||..|.||:||.|.|..::..  ::.|......       .|:.|...|.   
plant   271 EK--------HAADGLGRVDYALASGGAFVMEH--SDPYLVGKGS-------SWFATTMRRAHTN 318

  Fly   837 ---AISPNV-QPGECWAFQGFPGFLVLKLNSLVYVTGFTLEHIPKSLSPTGRIESAPRNFTVWG- 896
               .:||:. :||:|:..:|..|::.::|...:....|||||:.||::...  .|||::..|.| 
plant   319 AVKMLSPSFGEPGQCFPLKGSEGYVQIRLRGPIIPEAFTLEHVAKSVAYDR--SSAPKDCRVSGS 381

  Fly   897 -------LEQEKDQEPVLFGDYQFEDNGASLQYFAVQNLDIKRPYEIVELRIETNHGHPTYTCLY 954
                   .|.|..|   |..::.::.:.::.|.|.:.........:.|.|...:|||..::||:|
plant   382 LQGPESSAETENMQ---LLTEFTYDLDRSNAQTFNILESSSSGLIDTVRLDFTSNHGSDSHTCIY 443

  Fly   955 RFRVHGKPP 963
            ||||||:.|
plant   444 RFRVHGRAP 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
koiNP_001260738.1 Sad1_UNC 827..962 CDD:285038 43/149 (29%)
SUN1NP_196118.1 Smc <153..>275 CDD:224117 39/181 (22%)
Sad1_UNC 313..450 CDD:369494 40/141 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 67 1.000 Domainoid score I3507
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1569602at2759
OrthoFinder 1 1.000 - - FOG0000864
OrthoInspector 1 1.000 - - otm3562
orthoMCL 1 0.900 - - OOG6_102039
Panther 1 1.100 - - LDO PTHR12911
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X471
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.920

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