DRSC/TRiP Functional Genomics Resources

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Protein Alignment koi and SUN2

DIOPT Version :10

Sequence 1:NP_001260738.1 Gene:koi / 35594 FlyBaseID:FBgn0265003 Length:965 Species:Drosophila melanogaster
Sequence 2:NP_566380.2 Gene:SUN2 / 820242 AraportID:AT3G10730 Length:455 Species:Arabidopsis thaliana


Alignment Length:87 Identity:19/87 - (21%)
Similarity:32/87 - (36%) Gaps:19/87 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TGTATGTGTRQQSDGGDELAATTPTDDENLFINPTDGL------PNEHPALPSAYDSDSESNAVA 63
            :||.....|.:|:     |:....::::.||.....|.      |..:..|....||.|.:.:|.
plant   169 SGTLQYEATNEQN-----LSEIDQSEEKFLFFQNATGSSTCSFEPTANTQLTLCTDSASSNVSVQ 228

  Fly    64 DDDLLDDLPTSIIVTNIHSEVF 85
                    |.|....|:|..:|
plant   229 --------PKSSNTPNVHFSLF 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
koiNP_001260738.1 PRK03918 <462..>653 CDD:235175
Sad1_UNC 827..962 CDD:400199
SUN2NP_566380.2 Sad1_UNC 310..445 CDD:400199
Blue background indicates that the domain is not in the aligned region.

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