DRSC/TRiP Functional Genomics Resources

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Protein Alignment koi and sun2

DIOPT Version :10

Sequence 1:NP_001260738.1 Gene:koi / 35594 FlyBaseID:FBgn0265003 Length:965 Species:Drosophila melanogaster
Sequence 2:XP_001919691.1 Gene:sun2 / 796761 ZFINID:ZDB-GENE-091204-379 Length:577 Species:Danio rerio


Alignment Length:398 Identity:131/398 - (32%)
Similarity:210/398 - (52%) Gaps:86/398 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   605 ALSDKQAENADLHQSISNLK-----LGQEDLLERIQQHELSQDRRFHGLLAEIENKLSALNDSQF 664
            :||:.:.|.|:||:..:||.     |.:|.:.::.:...:..|.|             .:||   
Zfish   223 SLSNLRDEIANLHKREANLMRDIELLKEESVRQKAKSEMMQTDVR-------------TMND--- 271

  Fly   665 ALLNKQIKLSLVEILGFKQSTAGGSAGQLDDFDLQTWVRSMFVAKDYLEQQLLELNKRTNNNIRD 729
                             ....|....|| ...:|::.:.::...:|.|.:::..|... |||:|.
Zfish   272 -----------------HMRNAESERGQ-QISELKSSISNLHSTQDLLTRRVDALEAH-NNNLRA 317

  Fly   730 EIE-------------RSSILLMSDIS---QRLKREILLVVEAKHNESTKALKGHIRE------- 771
            |:.             .|||:|..::.   |.|:::||        |.....||..|:       
Zfish   318 ELSDWLIKHLKDPSSLDSSIVLRPELQRALQDLEKQIL--------EKLAHEKGSSRDVWRTVGE 374

  Fly   772 ------------EEVRQIVKTVLAIYDADKTGLVDFALESAGGQILSTRCTESYQTKSAQISVFG 824
                        ::|::||...:::|.||..||.|:||||:|..:|:|||:|:|:|:||.:|:||
Zfish   375 TLQQEGAGAATIQDVKEIVHRAISLYRADGIGLADYALESSGASVLNTRCSETYKTRSACLSLFG 439

  Fly   825 IPLWYPTNTPRVAISPNVQPGECWAFQGFPGFLVLKLNSLVYVTGFTLEHIPKSLSPTGRIESAP 889
            |||||.:.:||..|.|.:.||:||||:|..||||:.|:..|.:|..|||||||.||||||::|||
Zfish   440 IPLWYHSESPRTVIQPELYPGKCWAFRGSQGFLVISLSYPVAITHVTLEHIPKDLSPTGRLDSAP 504

  Fly   890 RNFTVWGLEQEKDQEPVLFGDYQFEDNGASLQYFAVQNLDIKRPYEIVELRIETNHGHPTYTCLY 954
            ::|:|:|:..| .::..|.|.:.::.:|..:|.|.:.  ::...|.:||||:.:|.||..|||:|
Zfish   505 KDFSVYGVSNE-TEDGKLLGTFIYDQDGEPIQTFKLP--EVSDVYSMVELRVLSNWGHLEYTCVY 566

  Fly   955 RFRVHGKP 962
            ||||||:|
Zfish   567 RFRVHGEP 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
koiNP_001260738.1 PRK03918 <462..>653 CDD:235175 12/52 (23%)
Sad1_UNC 827..962 CDD:400199 64/134 (48%)
sun2XP_001919691.1 Smc <213..>391 CDD:440809 39/210 (19%)
HTH_SUN2 343..399 CDD:436594 11/63 (17%)
Sad1_UNC 442..574 CDD:400199 64/134 (48%)

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