DRSC/TRiP Functional Genomics Resources

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Protein Alignment koi and spag4

DIOPT Version :10

Sequence 1:NP_001260738.1 Gene:koi / 35594 FlyBaseID:FBgn0265003 Length:965 Species:Drosophila melanogaster
Sequence 2:NP_609510.2 Gene:spag4 / 34581 FlyBaseID:FBgn0032368 Length:275 Species:Drosophila melanogaster


Alignment Length:355 Identity:82/355 - (23%)
Similarity:145/355 - (40%) Gaps:93/355 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   617 HQSISNLKLGQEDLLERIQ--QHELSQDRRFHGLLAEIENKLSALNDSQFALLNKQIKLSLVEIL 679
            |.|.:|  ||...|.|.:.  .|.|.|.        :|::|: |....:|..|..:.|       
  Fly     3 HNSRNN--LGIMRLREDVDDISHILRQQ--------QIDSKV-AQGSCKFNCLGGEPK------- 49

  Fly   680 GFKQSTAGGSAGQLDDFDLQTWVRSMFVAKDYLEQQLLELNKRTNNNIRDEIERSSILLMSDISQ 744
                   |..:|..::.|:..:|.::|              ||...::.|::            .
  Fly    50 -------GVGSGMCNNRDVSAYVDTLF--------------KRKIGHLMDDV------------Y 81

  Fly   745 RLKREILLVVEAKHNESTKALKGHIREEEVRQIVKTVLAIYDADKTGLVDFALESAGGQILSTRC 809
            .||::::     ..:.|:|:.:...:.|.|            |.....:::|.|..|.:|::.: 
  Fly    82 NLKKQVM-----SADCSSKSAQSTPKPESV------------ALAKPRINYASEELGARIINVK- 128

  Fly   810 TESYQTKSAQISVFGIPLWYPTNTPRVAISPNVQPGECWAFQGFPGFLVLKLNSLVYVTGFTLEH 874
            ..|....:...|:.|:.  :.||.|...|...:.||.|:.|.|....:.|.|...:.|...||.|
  Fly   129 AHSIDGTNIIRSLLGLD--FSTNPPVNMIRTGLSPGSCFGFNGSRATVTLHLARTIIVEAITLTH 191

  Fly   875 IPKSLSPTGRIESAPRNFTVWGLEQEKDQEPVLFGDYQFEDNGAS--LQYFAV------QNLDIK 931
            :.:.::|...::|||:||.|:||..|..:..:| |.:.: ||.|:  .|.::|      :|||..
  Fly   192 VAREMTPDLCVKSAPKNFDVYGLRSENSKRELL-GQWSY-DNAANKRTQSYSVRSDTFFRNLDFS 254

  Fly   932 RPYEIVELRIETNHGHPTYTCLYRFRVHGK 961
                     ..:||| ...||:||..|:|:
  Fly   255 ---------FNSNHG-ANSTCIYRVEVYGR 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
koiNP_001260738.1 PRK03918 <462..>653 CDD:235175 10/37 (27%)
Sad1_UNC 827..962 CDD:400199 44/143 (31%)
spag4NP_609510.2 Sad1_UNC 148..274 CDD:400199 43/137 (31%)

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