DRSC/TRiP Functional Genomics Resources

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Protein Alignment koi and Sun5

DIOPT Version :10

Sequence 1:NP_001260738.1 Gene:koi / 35594 FlyBaseID:FBgn0265003 Length:965 Species:Drosophila melanogaster
Sequence 2:NP_001402614.1 Gene:Sun5 / 296289 RGDID:1306357 Length:369 Species:Rattus norvegicus


Alignment Length:324 Identity:91/324 - (28%)
Similarity:151/324 - (46%) Gaps:65/324 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   659 LNDSQFALLNKQI--KLSLVE--ILGFKQSTAGGSAGQLDDFDLQTWVRSMFVAK-------DYL 712
            ||..:|.||.:::  |:.|:.  :.||                   |:.||.:..       |.:
  Rat    87 LNTCRFKLLFQKLIEKMGLLVLCVFGF-------------------WMFSMHLPSKMEVWQDDSI 132

  Fly   713 EQQLLELN------KRTNNNIRDEIERSSILLMSDISQRLKREILLVVEAKHNESTKALKGHIRE 771
            ...|..|.      :.....|:| :..|..||::.:.|         :||..:|           
  Rat   133 SGPLQSLRMYQEKVRHHTGEIQD-LRGSMNLLIAKLQQ---------MEAMSDE----------- 176

  Fly   772 EEVRQIVKTVLAIYDADKTGLVDFALESAGGQILSTRCTESYQTKSAQISVFGIPLWYPTNTPRV 836
               :::.:.::.:...|.....||||:|.|..|.....:.:|....|:.....|.||.....|.|
  Rat   177 ---QKMTQKIMKMIQGDFIEKPDFALKSIGASIDFEHTSPTYNHDKARSYWNWIRLWNYAQPPDV 238

  Fly   837 AISPNVQPGECWAFQGFPGFLVLKLNSLVYVTGFTLEHIPKSLSPTGRIESAPRNFTVWGLEQEK 901
            .:.|:|.||.||||.|..|.:.::|...||::..||:||||::|.:|.:::||::|.::|:| ..
  Rat   239 ILEPSVTPGNCWAFAGDRGQVTIRLAQKVYLSNVTLQHIPKTISLSGCLDTAPKDFVIYGME-HP 302

  Fly   902 DQEPVLFGDYQFEDNGASLQYFAVQNLDIKRPYEIVELRIETNHGHPTYTCLYRFRVHG--KPP 963
            .:|.|..|.:||:.... :|.|.:|| ...|.:..|:::|.:|.|:|.:|||||.||||  .||
  Rat   303 PREEVFLGAFQFQPENI-IQTFQLQN-QPPRGFAAVKVKISSNWGNPRFTCLYRVRVHGCATPP 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
koiNP_001260738.1 PRK03918 <462..>653 CDD:235175
Sad1_UNC 827..962 CDD:400199 54/136 (40%)
Sun5NP_001402614.1 Sad1_UNC 229..359 CDD:400199 52/132 (39%)
Blue background indicates that the domain is not in the aligned region.

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