DRSC/TRiP Functional Genomics Resources

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Protein Alignment koi and Spag4

DIOPT Version :10

Sequence 1:NP_001260738.1 Gene:koi / 35594 FlyBaseID:FBgn0265003 Length:965 Species:Drosophila melanogaster
Sequence 2:NP_631890.3 Gene:Spag4 / 245865 MGIID:2444120 Length:443 Species:Mus musculus


Alignment Length:233 Identity:74/233 - (31%)
Similarity:122/233 - (52%) Gaps:5/233 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   730 EIERSSILLMSDISQRL--KREILLVVEAKHNESTKALKGHIREEEVRQIVKTVLAIYDADKTGL 792
            |.|.:.:|.:|....|:  :.:.|..::|:.|:..|.:.. :|.....::.|.|....:.|....
Mouse   195 ENEPTEMLTLSQYHHRVHSQGQQLQQLQAELNKLHKEVSS-VRAAHSERVAKLVFQRLNEDFVRK 258

  Fly   793 VDFALESAGGQILSTRCTESYQTKSAQISVFGIPLWYPTNTPRVAISPNVQPGECWAFQGFPGFL 857
            .|:||.|.|..|...:.:..|:.::.......:..|.....|.|.:.|:|.||.||||:|..|.:
Mouse   259 PDYALSSVGASIDLEKTSSDYEDQNTAYFWNRLSFWNYARPPSVILEPDVFPGNCWAFEGDKGQV 323

  Fly   858 VLKLNSLVYVTGFTLEHIPKSLSPTGRIESAPRNFTVWGLEQEKDQEPVLFGDYQFEDNGASLQY 922
            |::|...|.::..||:|.|.:::.||...||||:|.|:|| |..|:..|..|.:.|:...:.:|.
Mouse   324 VIRLPGHVQLSDITLQHPPPTVAHTGGASSAPRDFAVYGL-QADDETEVFLGKFIFDVQKSEIQT 387

  Fly   923 FAVQNLDIKRPYEIVELRIETNHGHPTYTCLYRFRVHG 960
            |.:|| |....:..|:::|.:|.|||.:|||||.|.||
Mouse   388 FHLQN-DPPSAFPKVKIQILSNWGHPRFTCLYRVRAHG 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
koiNP_001260738.1 PRK03918 <462..>653 CDD:235175
Sad1_UNC 827..962 CDD:400199 54/134 (40%)
Spag4NP_631890.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..107
Sad1_UNC 293..425 CDD:400199 54/134 (40%)
Blue background indicates that the domain is not in the aligned region.

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