DRSC/TRiP Functional Genomics Resources

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Protein Alignment koi and sun-1

DIOPT Version :9

Sequence 1:NP_001260738.1 Gene:koi / 35594 FlyBaseID:FBgn0265003 Length:965 Species:Drosophila melanogaster
Sequence 2:NP_506281.1 Gene:sun-1 / 179802 WormBaseID:WBGene00006311 Length:473 Species:Caenorhabditis elegans


Alignment Length:382 Identity:87/382 - (22%)
Similarity:141/382 - (36%) Gaps:104/382 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   643 RRFHGLLAEIENKLSALNDSQFALLNKQIKLSLVEILGFKQSTAGGSAGQLDDFDLQTW------ 701
            |||....|:.:..|.|:  ..||:|.|..:..|.:      .|...|.|...|.| ..|      
 Worm   103 RRFVPTWAQFKRTLMAV--VLFAMLYKYARDCLFD------GTHHNSEGSYADKD-ANWASEKQK 158

  Fly   702 -------VRSMFVA--------KDYLE---QQLLELNKRTNNNIRDEIERSSI--LLMSDISQRL 746
                   :|:.|.|        .|:||   :.:||.:|....:..:|:::..:  ..:||..|::
 Worm   159 FHQTISNLRAEFSAHDKQLDFKTDHLEKLLENVLEHSKGWKESAIEELKQIKLWQAEISDALQQM 223

  Fly   747 KREILLVVEAKHNESTKALKGHIREEEVRQIVKTV-------LAIYDADKTGL--VDFALESAGG 802
            |:||   .:||   |||.:  |...|:..:...|.       |......:..|  |:.|....|.
 Worm   224 KKEI---DDAK---STKII--HSTPEKAPETAPTASLPPSSQLQPMHITRRALLGVNVANSLIGA 280

  Fly   803 QILSTRCTESYQTKSAQISV-----FGIPLWYPTNTPRVAISPN--VQPGECWAFQGFPGFLVLK 860
            .|       .:...|..:|.     :....::.|.....|:...  :.|||.|........|.:|
 Worm   281 SI-------DHSCSSRPVSAKDGFFYDFMSYFGTFQEGYALLDRDVLSPGEAWCTYDKRATLTVK 338

  Fly   861 LNSLVYVTGFTLEHIPKSLSP-----TGRIES-APRNF----------TVWGLEQEKDQEPVLFG 909
            |...|         ||||:|.     :|.:.: ||:.:          |.|        :| |..
 Worm   339 LARFV---------IPKSVSYQHVRWSGIVPNHAPKLYDVVACTDSCCTKW--------QP-LVA 385

  Fly   910 DYQFEDNGASL----QYFAVQNLDIKRPYEIVELRIETNHGHPTYTCLYRFRVHGKP 962
            :.::::...|.    |:.:|..:....|...|:.|...|||....||.|..||:|:|
 Worm   386 NCEYKERDGSYDEQEQFCSVPTIQNHSPINHVQFRFRENHGDMPKTCAYLIRVYGEP 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
koiNP_001260738.1 Sad1_UNC 827..962 CDD:285038 37/156 (24%)
sun-1NP_506281.1 Sad1_UNC 302..442 CDD:285038 37/157 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12911
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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