Protein Alignment SdhB and sdhb

DIOPT Version :10

• Sequence 1: NP_477101.1
• Gene: SdhB / 35590
• FlyBaseID: FBgn0014028
• Length: 297
• Species: Drosophila melanogaster
• Sequence 2: NP_001092210.1
• Gene: sdhb / 562149
• ZFINID: ZDB-GENE-030131-8005
• Length: 280
• Species: Danio rerio
• Alignment Length: 278
• Identity: 200/278 - (71%)
• Similarity: 234/278 - (84%)
• Gaps: 8/278 - (2%)

  Fly    10 LSRVGSLVARNQMRAISNGTAQLEQQAQPKEAQEPQIKKFEIYRWNPDNAGEKPYMQTYEVDLRE 74
            |||..|.|.|..:.|:     :..|.|....|| |:||||:||||:||..|:||.|||||:||..
Zfish     8 LSRCCSAVHRPAVTAV-----RFAQTAAAPAAQ-PRIKKFQIYRWDPDTVGDKPRMQTYEIDLNT 66

  Fly    75 CGPMVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDINTSKSLKVYPLPH 139
            |||||||||||||||||.||||||||||||||||||||.|.|||||::|||.||||..|:|||||
Zfish    67 CGPMVLDALIKIKNEMDSTLTFRRSCREGICGSCAMNINGGNTLACLNKIDTNTSKVTKIYPLPH 131

  Fly   140 MYVVRDLVPDMNNFYEQYRNIQPWLQRKNEAGEKKGKAQYLQSVEDRSKLDGLYECILCACCSTS 204
            ||||:||||||:|||.||::|:|:|::|:|:  ::||.|||||||||.|||||||||||||||||
Zfish   132 MYVVKDLVPDMSNFYAQYKSIEPYLKKKDES--QQGKQQYLQSVEDRQKLDGLYECILCACCSTS 194

  Fly   205 CPSYWWNAEKYLGPAVLMQAYRWIIDSRDENSAERLNKLKDPFSVYRCHTIMNCTRTCPKGLNPG 269
            ||||||||:||||||||||||||:|||||:.:.:||:||:||||:||||||||||||||||||||
Zfish   195 CPSYWWNADKYLGPAVLMQAYRWMIDSRDDFTEDRLSKLQDPFSLYRCHTIMNCTRTCPKGLNPG 259

  Fly   270 RAIAEIKKLLSGLASKPA 287
            :|||||||::.....|.|
Zfish   260 KAIAEIKKMMVTYKQKDA 277

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SdhB	NP_477101.1	PLN00129	6..279	CDD:215067	198/268 (74%)
sdhb	NP_001092210.1	PLN00129	37..269	CDD:215067	186/233 (80%)