Protein Alignment SdhB and Sdhb

DIOPT Version :10

• Sequence 1: NP_477101.1
• Gene: SdhB / 35590
• FlyBaseID: FBgn0014028
• Length: 297
• Species: Drosophila melanogaster
• Sequence 2: XP_063143542.1
• Gene: Sdhb / 298596
• RGDID: 1308598
• Length: 295
• Species: Rattus norvegicus
• Alignment Length: 287
• Identity: 184/287 - (64%)
• Similarity: 219/287 - (76%)
• Gaps: 22/287 - (7%)

  Fly    10 LSRVGSLVARNQMRAISNGTAQLEQQAQPKEAQEPQIKKFEIYRWNPDNAGEKPYMQTYEVDLRE 74
            |.|||.     |.:|.        ::||...|..|:||.|.||||:||.||:||.||||:|||.:
  Rat    18 LGRVGL-----QFQAC--------REAQTAAAAAPRIKTFAIYRWDPDKAGDKPRMQTYKVDLNK 69

  Fly    75 CGPMVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDINTSKSLKVYPLPH 139
            |||||||||||||||:|.||||||||||||||||||||.|.|||||..:||.:..|..|:|||||
  Rat    70 CGPMVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTDLGKVSKIYPLPH 134

  Fly   140 MYVVRDLVPDMNNFYEQYRNIQPWLQRKNEAGEKKGKAQYLQSVEDRSKLDGLYECILCACCSTS 204
            |||::|||||::|||.||::|:|:|::|:|:.|  ||.|||||:|||.|||||||||||||||||
  Rat   135 MYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQE--GKQQYLQSIEDREKLDGLYECILCACCSTS 197

  Fly   205 CPSYWWNAEKYLGPAVLMQAYRWIIDSRDENSAERLNKLKDPFSVYRCHTIMNCTRTCPKGLNPG 269
            |||||||.:||||||||||||||:||||||.:.|||.||:||||:||||||||||:||||...|.
  Rat   198 CPSYWWNGDKYLGPAVLMQAYRWMIDSRDEFTEERLAKLQDPFSLYRCHTIMNCTQTCPKVWQPW 262

  Fly   270 RAIAEIKKLLSGLA-------SKPAPK 289
            .:......::||.|       :.|.||
  Rat   263 PSRLRWMPVVSGGAWNGSQSQTPPGPK 289

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SdhB	NP_477101.1	PLN00129	6..279	CDD:215067	178/268 (66%)
Sdhb	XP_063143542.1	None