Protein Alignment SdhB and sdh2

DIOPT Version :10

• Sequence 1: NP_477101.1
• Gene: SdhB / 35590
• FlyBaseID: FBgn0014028
• Length: 297
• Species: Drosophila melanogaster
• Sequence 2: NP_593530.2
• Gene: sdh2 / 2542842
• PomBaseID: SPAC140.01
• Length: 275
• Species: Schizosaccharomyces pombe
• Alignment Length: 280
• Identity: 171/280 - (61%)
• Similarity: 207/280 - (73%)
• Gaps: 29/280 - (10%)

  Fly     1 MLATEARQILSRVGSLVARNQMRAISNGTAQLEQQAQPKEAQEPQIKKFEIYRWNPDNAGEKPYM 65
            |:||||.                 ||..:|..:.|.:       .:|.||||||||:....||.:
pombe    23 MMATEAN-----------------ISATSANPQSQGE-------NLKTFEIYRWNPEKPEVKPKL 63

  Fly    66 QTYEVDLRECGPMVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDINTSK 130
            |.|.|||.:|||||||||||||||.||||||||||||||||||||||.|:||||||..|. ..:|
pombe    64 QKYTVDLTKCGPMVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNINGSNTLACICNIK-KDNK 127

  Fly   131 SLKVYPLPHMYVVRDLVPDMNNFYEQYRNIQPWLQRKNEAGEKKGKAQYLQSVEDRSKLDGLYEC 195
            ..|:|||||.::|:|||||:..||:||::|:||||..|...:|    ::.||..||:||||||||
pombe   128 PTKIYPLPHCFIVKDLVPDLTYFYKQYKSIEPWLQNDNIPKDK----EFYQSRADRAKLDGLYEC 188

  Fly   196 ILCACCSTSCPSYWWNAEKYLGPAVLMQAYRWIIDSRDENSAERLNKLKDPFSVYRCHTIMNCTR 260
            ||||||||||||||||:|:|||||||||||||||||||:.:|:||:.:::..|||||||||||.|
pombe   189 ILCACCSTSCPSYWWNSEEYLGPAVLMQAYRWIIDSRDQATAKRLDVMQNSMSVYRCHTIMNCAR 253

  Fly   261 TCPKGLNPGRAIAEIKKLLS 280
            |||||||||.|||::|.|::
pombe   254 TCPKGLNPGLAIAKVKALMA 273

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SdhB	NP_477101.1	PLN00129	6..279	CDD:215067	166/272 (61%)
sdh2	NP_593530.2	PLN00129	25..273	CDD:215067	170/276 (62%)