DRSC/TRiP Functional Genomics Resources

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Protein Alignment Epac and rapgef2a

DIOPT Version :9

Sequence 1:NP_001097202.2 Gene:Epac / 35588 FlyBaseID:FBgn0085421 Length:1006 Species:Drosophila melanogaster
Sequence 2:XP_005170987.2 Gene:rapgef2a / 793952 ZFINID:ZDB-GENE-090313-280 Length:1486 Species:Danio rerio


Alignment Length:1202 Identity:267/1202 - (22%)
Similarity:455/1202 - (37%) Gaps:374/1202 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 AMDKRPCDRNLRDVELISCRLRRVEPLCRLPGSALQQLAMCGFYEDLEKGVTLFRAGEQGRFWYA 72
            |:.|.|.||..:|::::...|..:|.|..|....|:.:.....||..:....|:...:.|..||.
Zfish    17 AIMKIPADRTQQDLQIVYSYLHGMEALSNLREHQLRLMCETVRYEQHDANEVLYYPDDIGTCWYI 81

  Fly    73 VLGGSLEVRYHAHADADGKSAVTLCNLGVGATFGESVLHDLPRDSTVVTKTTCELLRVEQQD--- 134
            :|.||:.:          |.::.|..    ::||:.....|.|....:.....|::.|:..|   
Zfish    82 LLSGSVFI----------KESMFLPR----SSFGKRSAGSLRRGCECIVLEASEMIVVDYMDDND 132

  Fly   135 ---------------FRLIWEK-NKELMNDIFTNCKLKNGFGPSVQATAAATSPTKRPLSPDHPN 183
                           ||.|.:: .::.:.|...|..:.....|....:....|......|..||:
Zfish   133 EYFQRQASHRQSRRRFRKINQRGERQTIIDTVDNYPVSKPPLPPGYHSECPKSQLPTDFSKLHPS 197

  Fly   184 PALPITETPSPAMNRMGWALRTLLVADN-SSCLKDRKVSGKLIRKCAPGTELVDWLVNLSPIVHT 247
            .:.....|.|.:        |:.:.:|: ||.|.|                              
Zfish   198 DSCHSHMTSSQS--------RSSIASDSGSSSLSD------------------------------ 224

  Fly   248 RAQAAGMWQALLEEGVLAHVNKEQPFKDKCFLYRFRIDEEGGTAAAGVPQA----------EDLG 302
                                           :|:....|.|....:|:|:.          ||:|
Zfish   225 -------------------------------IYQATESECGDMDLSGLPETAVDSDEDDDDEDVG 258

  Fly   303 AANEHIREALSALFQRGPDATLRMILRKPSHERTSEELELVFEELVHIAALSHLSTSIKRELSSI 367
            ...:|       |..|.   .:|..|.|...:||.:::|.:.|.:..:.|.:.||.|::|||.::
Zfish   259 RGTDH-------LMSRD---IVRDCLEKDPMDRTDDDIEQLLEFVQQLPAFASLSVSVRRELCAV 313

  Fly   368 FVFEAHAQAGTILFNQGDEGRSWYILLKGSVDVVIHGKGTVATLKTGDDFGKLALINDAPRAATI 432
            .||....:||||:.|.|:|..||.::|.|:|: ||:..|...::..|..||....:........:
Zfish   314 MVFAVVERAGTIVLNHGEELDSWSVILNGAVE-VIYLDGRSESVCMGGSFGVCPSMEKQLMIGVM 377

  Fly   433 VLKENNCHLLRVDKEHFNRILRDVEANTLRLQEHGKDVLV-----LERVAKQRGQHSAFKYTVMS 492
            ..|.::|..:.:.::.:..||..||.||.|::|.|:.|:|     |:|...::|      :.|:.
Zfish   378 RTKVDDCQFVCIAQQDYCCILNQVEQNTQRVEEEGEIVMVKEHRELDRTGTRKG------HIVVK 436

  Fly   493 GTPAKMLEHLLETRLGQSVGGMDP-FLDDFLLTHIVFMPVVQLVDE-LANYFHCDAHEDAQTPED 555
            ||..::::||:|   ..|:  :|| :::|||||:..|:|...::.: |.::|:.....|      
Zfish   437 GTAERLMQHLVE---DHSI--VDPTYIEDFLLTYRTFLPSPLILGQRLLDWFNDPCLRD------ 490

  Fly   556 REYIINFKKRVIQFMQKWVMAVRH-AAFE-EPSVCDFIED------------------LAAEVEA 600
                     ||.:.:..||.  .| :.|| :|.:..|:|:                  :|...:|
Zfish   491 ---------RVTRVVLLWVN--NHFSDFEGDPDMTSFLEEFQSNLEREKMTGQLRLLNIACAAKA 544

  Fly   601 DP-------------------------------------------------------------DL 604
            .|                                                             .|
Zfish   545 KPRVITVTRTAREIPLPFTLIGGAERGTRLFISSVEVGSKAEEAGLKRGDQILEVNGQTFENVQL 609

  Fly   605 NEETSIVHN-------VLTQM-------ARYQEDRNQNA--------GQK---WKLPPNG----- 639
            ::.|.|:.|       |.|.:       ||..|:|....        |:|   :.:|..|     
Zfish   610 SKATEILRNNIQLSMSVKTNLLVFKELVARVAEERKNGVPHLPKIGDGKKNCRYSIPELGAGSDV 674

  Fly   640 ------------------------------------------------------------QPICL 644
                                                                        .|...
Zfish   675 IGQEKISKKAKAHTVGGRNKLMKILDKTRMSILPQKPYSDLGLGQTQDDSIVGLRQNKQTPPTMP 739

  Fly   645 FSGNATPSKTVIRPD-----------------------DDIIFRVYCADHTYCTLRFPMHTTAEL 686
            .||..:.|    .||                       .|.:.|::.||.....|.....|||..
Zfish   740 VSGTLSSS----NPDLAQGQQRIIDYSTQPPAPGFTQLQDQVLRIFKADQQSRYLLANRDTTARE 800

  Fly   687 IKACAADKLQLNRGPEDLVLVEVKSNGERSVFKDNDVSIPTGLS-LNGRLFVSVKDHLDA----- 745
            ....|..:..|:..||...|.|| |..:..|.|..  .:|..|| |..|:.:|.:.:|.:     
Zfish   801 AANLAIKEFGLSASPEAFSLCEV-SVTQEGVIKQR--RLPDQLSKLADRIQLSARYYLKSNMETE 862

  Fly   746 --LTQLQEQECPTEGVDIDLEILSTKELAYHITLFEWDLFWAVHEYELLYHTFGRHHFGKITANL 808
              .:.::..|...|.| :.|..||:.|:|..::...:.||..:...:.:...| :.|..:...||
Zfish   863 TLCSDVEALEMQRESV-VPLLSLSSMEIANQLSARNYLLFSCIEPTDYINDLF-KLHPQEPPTNL 925

  Fly   809 DVFLRRFNEVQYWIVTELVSTPSLSKRVGLVRKFIKLAAYCKEYQNLNAFFAVVMGLSNMAVSRL 873
            ..|....|:..:|:.||:|...:|:|||.:::.|||:|.:|::.:|.|:.||::.|.:...||||
Zfish   926 RNFEGLVNQETFWVATEIVQETNLAKRVKIIKHFIKIALHCRDCKNFNSMFAIISGFNLAPVSRL 990

  Fly   874 QQTWEKIPSKFRKIFQEFEALIDPSRNHRAYRVFVGK--LQPPLIPFMPLLLKDMTFAHEGNKTS 936
            :.|||::|.|:.|:..|.:.:.|||||...||..:.|  ||||:||..|::.||:||.||||.:.
Zfish   991 RSTWERLPGKYEKLLAELQDVFDPSRNMAKYRNLLNKHNLQPPVIPLFPVIKKDLTFLHEGNNSE 1055

  Fly   937 LDGLVNFEKMHMMAQTMRTIRFCRSRSLGLEP 968
            :||||||||:.|:|:.:|.:  .|..|:.::|
Zfish  1056 VDGLVNFEKLRMIAREIRHV--VRMASITMDP 1085

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EpacNP_001097202.2 Crp 28..>146 CDD:223736 26/136 (19%)
CAP_ED 36..146 CDD:237999 23/128 (18%)
DEP_Epac 199..330 CDD:239884 19/141 (13%)
CAP_ED 352..463 CDD:237999 35/110 (32%)
Crp 373..525 CDD:223736 47/157 (30%)
RasGEF_N 489..594 CDD:279012 29/126 (23%)
UBQ 665..>714 CDD:294102 15/48 (31%)
RasGEF 766..1002 CDD:214539 78/205 (38%)
rapgef2aXP_005170987.2 CAP_ED 42..148 CDD:237999 21/119 (18%)
cNMP 299..414 CDD:197516 37/115 (32%)
RasGEFN 430..543 CDD:214571 31/140 (22%)
PDZ_signaling 546..627 CDD:238492 5/80 (6%)
UBQ 775..858 CDD:320785 25/85 (29%)
RasGEF 881..1085 CDD:238087 78/206 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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