DRSC/TRiP Functional Genomics Resources

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Protein Alignment Epac and rgl3

DIOPT Version :9

Sequence 1:NP_001097202.2 Gene:Epac / 35588 FlyBaseID:FBgn0085421 Length:1006 Species:Drosophila melanogaster
Sequence 2:XP_012808636.1 Gene:rgl3 / 100485337 XenbaseID:XB-GENE-493046 Length:712 Species:Xenopus tropicalis


Alignment Length:330 Identity:69/330 - (20%)
Similarity:130/330 - (39%) Gaps:82/330 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   734 RLFVSVKDHLD-------ALTQLQEQECPTE--GVDIDLEILSTKELAYHITLFEWDLFWAVHEY 789
            ||..|:::.::       :...||..|..||  |..|||.....:::|..:||.:.|||..:...
 Frog   208 RLLQSLQEEMEESPTPMGSKVNLQPVEGDTETPGPTIDLLSFPPQDVAEQLTLIDVDLFQKLQSC 272

  Fly   790 ELLYHTFGRHHFGKITANLD------------VFLRRFNEVQYWIVTELVSTPSL--SKRVGLVR 840
                     |..|.|.:..|            ..:.:||.|...::..::|...|  .:|..::.
 Frog   273 ---------HCLGSIWSQRDKKENRNVAPSVRATVAQFNAVTACVIASVLSDVQLKPQQRAKVLE 328

  Fly   841 KFIKLAAYCKEYQNLNAFFAVVMGLSNMAVSRLQQTWEKIPSKFRKIFQEFEALIDPSRNHRAYR 905
            |:|.:|.:|:..:|.::..|::..|.:..:.||::||..:......||.:...:.....||...|
 Frog   329 KWICIAQHCRFLRNFSSLRAILSALQSNPLYRLKRTWAAVSRDNLNIFHKLSDIFSDENNHGMSR 393

  Fly   906 VFVGKLQPPL-----------------------------IPFMPLLLKDMTFAHEGNKTSL---- 937
            ..:.|.:.||                             :|::...|.|:...    .|:|    
 Frog   394 EILTKEEIPLRRTNSARNEPRPLQRSASQVRSTRVLQGTVPYLGTFLTDLIML----DTALPDCT 454

  Fly   938 -DGLVNFEK----MHMMAQTMRTIRFCRSRSLGLEPPSPKSEGEVRSYISSFRVIDNQRVLTAMS 997
             .||:||||    ..::|:..:....||...|..:|..      :|::.|..::.::|..  .:|
 Frog   455 EGGLINFEKRRKEYEVLAKIQKLQLTCRHYVLTAKPEI------LRAFYSQRQLTEDQSY--RIS 511

  Fly   998 QKVEP 1002
            :.:||
 Frog   512 RTIEP 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EpacNP_001097202.2 Crp 28..>146 CDD:223736
CAP_ED 36..146 CDD:237999
DEP_Epac 199..330 CDD:239884
CAP_ED 352..463 CDD:237999
Crp 373..525 CDD:223736
RasGEF_N 489..594 CDD:279012
UBQ 665..>714 CDD:294102
RasGEF 766..1002 CDD:214539 55/287 (19%)
rgl3XP_012808636.1 RasGEF_N 91..191 CDD:366199
RasGEF 246..517 CDD:214539 58/292 (20%)
RA_RalGDS_like 623..708 CDD:340449
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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