DRSC/TRiP Functional Genomics Resources

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Protein Alignment Epac and rapgefl1

DIOPT Version :9

Sequence 1:NP_001097202.2 Gene:Epac / 35588 FlyBaseID:FBgn0085421 Length:1006 Species:Drosophila melanogaster
Sequence 2:XP_001921020.3 Gene:rapgefl1 / 100149497 ZFINID:ZDB-GENE-131121-404 Length:621 Species:Danio rerio


Alignment Length:543 Identity:199/543 - (36%)
Similarity:290/543 - (53%) Gaps:64/543 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   494 TPAKMLEHLLETRLGQSVGG-MDPFLDDFLLTHIVFMPVVQLVDELANYFHCDAHEDAQTP---- 553
            ||..:...||::..|:.... .:..||||:|||.:|:...:....|...|..:..:....|    
Zfish   106 TPENLALALLDSVAGKRYANCTEILLDDFMLTHPIFLAPDKFQQVLLQQFSSEGKQGEGWPGWDG 170

  Fly   554 EDREYIINFKKRVIQFMQKWVMAVRHAAFEEPSVCDFIEDLAAEVEAD--------------PDL 604
            .:|:                 :||...||.   ..|...||..| |.|              .:|
Zfish   171 AERK-----------------LAVLTVAFR---YLDTYRDLLQE-EGDRSNTFPKELYLCAVDEL 214

  Fly   605 NEETSIVHNVLTQMARY--------QEDRNQNAGQKWKLPPNGQPI--CLFSGNATPSKTVIRPD 659
            |....:|.:|| ::.|:        :||:.....|...|..:.:.|  ||      ..:...|..
Zfish   215 NRFPELVEDVL-KLQRWTEILHSPAEEDKESRKKQVRPLFRHFRRIDACL------QPREAFRGS 272

  Fly   660 DDIIFRVYCADHTYCTLRFPMHTTAELIKACAADKLQLNRG----PEDLVLVEVKSNGERSVFKD 720
            |:|..|||..||:|.|:|..:......|.|...:|||.:..    |.:|:||.|.|:||::||:.
Zfish   273 DEIFCRVYTPDHSYVTIRSRLSCRVGEILALVKEKLQYSEDQPTQPANLILVAVTSSGEKAVFRP 337

  Fly   721 NDVSIPTGLSLNGRLFVSVKDHLDALTQLQEQECPTEGVDIDLEILSTKELAYHITLFEWDLFWA 785
            :|.::.|.|.:|..||......|::|..|.|:...|.| |..|..:|.:|:|..:.:|:|:||..
Zfish   338 SDEAVFTTLGVNTHLFACEPAELESLIPLPEEIHWTPG-DSKLHDMSAEEVANQLVVFDWELFSC 401

  Fly   786 VHEYELLYHTFGRHHFGKITANLDVFLRRFNEVQYWIVTELVSTPSLSKRVGLVRKFIKLAAYCK 850
            |||.|.:.:.|..........||::.|:|.:|||:|:.||::...||.||:.|:|||||:||.||
Zfish   402 VHEVEFVCYVFHGEQARWRPLNLELILQRCSEVQHWVATEILQCQSLPKRIQLLRKFIKIAALCK 466

  Fly   851 EYQNLNAFFAVVMGLSNMAVSRLQQTWEKIPSKFRKIFQEFEALIDPSRNHRAYRVFVGKLQPPL 915
            :.|:|.:|.|:|:||.|.|||||:.|||.:|.||||.||:||::.||||||::||..:..|:.||
Zfish   467 QQQDLLSFLALVLGLDNPAVSRLRLTWEGLPGKFRKQFQQFESIADPSRNHKSYRDLLASLRAPL 531

  Fly   916 IPFMPLLLKDMTFAHEGNKTSLDGLVNFEKMHMMAQTMRTIRFCRSRSLGLE-PPSPKSEGEVRS 979
            |||.||||||:||.||..||....||||||||.:|:.:|:||..||..|.:| .||| |..:.::
Zfish   532 IPFTPLLLKDLTFLHESCKTFHGELVNFEKMHKVAEMVRSIRRYRSSQLAMEAEPSP-SHLQTKA 595

  Fly   980 YISSFRVIDNQRVLTAMSQKVEP 1002
            |:...:|||||.:|..||.|:||
Zfish   596 YVRQLQVIDNQNLLFEMSSKLEP 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EpacNP_001097202.2 Crp 28..>146 CDD:223736
CAP_ED 36..146 CDD:237999
DEP_Epac 199..330 CDD:239884
CAP_ED 352..463 CDD:237999
Crp 373..525 CDD:223736 10/31 (32%)
RasGEF_N 489..594 CDD:279012 22/104 (21%)
UBQ 665..>714 CDD:294102 19/52 (37%)
RasGEF 766..1002 CDD:214539 117/236 (50%)
rapgefl1XP_001921020.3 RasGEF 379..619 CDD:214539 120/241 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3629
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D143470at2759
OrthoFinder 1 1.000 - - FOG0000899
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23113
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.920

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