DRSC/TRiP Functional Genomics Resources

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Protein Alignment Epac and ralgds

DIOPT Version :9

Sequence 1:NP_001097202.2 Gene:Epac / 35588 FlyBaseID:FBgn0085421 Length:1006 Species:Drosophila melanogaster
Sequence 2:XP_012823402.1 Gene:ralgds / 100135084 XenbaseID:XB-GENE-987988 Length:856 Species:Xenopus tropicalis


Alignment Length:567 Identity:105/567 - (18%)
Similarity:191/567 - (33%) Gaps:190/567 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   489 TVMSGTPAKMLEHLLETRLGQSVGGMDPFLDDFLLTHIVFMPVVQLVDELANYF-----HCDAHE 548
            ::.:||..|::|:|:....|..    ..::..||.|:..|....|::|.|.|.|     ..:...
 Frog   138 SIKAGTLEKLVEYLVSAFKGND----STYVTIFLCTYRAFATTKQVLDLLLNRFGRLHPQINGEH 198

  Fly   549 DAQTPEDREYIINFKKRVIQFMQKWVMAVRHAAFEEPS-VCDFIEDLAAEVEAD---PDLNEETS 609
            ...:.:||   :..|..:...:..|:........:.|. .|  ::.|...|..:   .||.....
 Frog   199 SHNSVDDR---LELKNTISSILGAWLDQYSEDFRQAPDYTC--LKQLITYVRHNIPGSDLERRAC 258

  Fly   610 IVHNVLTQMARYQEDRNQNAGQKWKLPPNGQPICLFSGNATPSKTVIRPDDDIIFRVYCADHTYC 674
               |:|||..|.|                              .:.:.||        ..|||.|
 Frog   259 ---NLLTQFKRQQ------------------------------ISALEPD--------VVDHTSC 282

  Fly   675 TLRFPMHTTAELIKACAADKLQLNRGPEDLVLVEVKSNGERSVFKDNDVSIPTGLSLNGRLFVSV 739
            |||                          ||...:.|:|:..                   |:|.
 Frog   283 TLR--------------------------LVEEPLLSDGKPD-------------------FLSF 302

  Fly   740 KDHLDALTQLQEQECPTEGVDIDLEILSTKELAYHITLFEWDLFWAVHEYELLYHTFG-----RH 799
            :..:                           ||...|:.:.:||..|    :.||..|     |.
 Frog   303 RQDM---------------------------LAEQFTVMDAELFKKV----VPYHCLGCIWSQRD 336

  Fly   800 HFGK--ITANLDVFLRRFNEVQYWIVTELVSTPSL--SKRVGLVRKFIKLAAYCKEYQNLNAFFA 860
            ..||  :...:...:.:||.|...:::..:...||  .:|..::.::|::|..|:..:|.::..|
 Frog   337 KKGKEHLAPTIRATVSQFNSVTNCVISTCLCDRSLKPQQRAKVIERWIEVARECRILKNFSSLRA 401

  Fly   861 VVMGLSNMAVSRLQQTWEKIPSKFRKIFQEFEALIDPSRNHRAYRVFVGK----------LQPP- 914
            ::..|...|:.||::||:::..:..:||.|...:.....||...|..:.|          :.|. 
 Frog   402 ILSALQCNAIHRLKKTWDEVSRESYRIFMELSEIFSDENNHSLSRELLIKEGTSKFATLDINPKR 466

  Fly   915 ----------------LIPFMPLLLKDMTFAHEGNKTSLD-GLVNFEKMHMMAQTMRTIRFCRS- 961
                            .||::...|.|:.......|..|: ||:||||.....:.:..|:..:| 
 Frog   467 AQKRQQQQREMGVMQGTIPYLGTFLTDLVMLDTAMKDYLESGLINFEKRRKEFEVIAQIKLLQSA 531

  Fly   962 -RSLGLEPPSPKSEGEVRSYISSFRVIDNQRVLT-----AMSQKVEP 1002
             .:....|.        .|::..|..::.   ||     ::|.::||
 Frog   532 CNNYSFLPD--------ESFVEWFHSVER---LTEAESYSLSCEIEP 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EpacNP_001097202.2 Crp 28..>146 CDD:223736
CAP_ED 36..146 CDD:237999
DEP_Epac 199..330 CDD:239884
CAP_ED 352..463 CDD:237999
Crp 373..525 CDD:223736 8/35 (23%)
RasGEF_N 489..594 CDD:279012 21/110 (19%)
UBQ 665..>714 CDD:294102 10/48 (21%)
RasGEF 766..1002 CDD:214539 57/279 (20%)
ralgdsXP_012823402.1 RasGEFN 135..265 CDD:214571 29/138 (21%)
RasGEF 299..564 CDD:238087 59/306 (19%)
RA_RalGDS 740..825 CDD:340729
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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