DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6a2 and Cyp4f40

DIOPT Version :10

Sequence 1:NP_523628.1 Gene:Cyp6a2 / 35587 FlyBaseID:FBgn0000473 Length:506 Species:Drosophila melanogaster
Sequence 2:NP_001102830.1 Gene:Cyp4f40 / 503122 RGDID:1559596 Length:523 Species:Rattus norvegicus


Alignment Length:414 Identity:106/414 - (25%)
Similarity:185/414 - (44%) Gaps:73/414 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 KWKDMRQRLTPTFTSGKMKFMFPTVIKVSEEFVKVITEQVP---------AAQNGAVLEIKELMA 180
            ||...|..|||.|.           ..:.:.:||:..:...         |:...|.|::.|.::
  Rat   143 KWSRHRSMLTPAFH-----------FNILKPYVKIFNDSTNIMHAKWLRLASGGSAHLDMFENIS 196

  Fly   181 RFTTDVIGTCAFGIECNTLRTPVSDF--RTMGQKVFTDMRHGKLLTMFVFSFPKLASRLRMRMMP 243
            ..|.|.:..|.|....|....| |::  ..:........|:.:||         |...|..|:.|
  Rat   197 LMTLDTLQKCVFSFNSNCQEKP-SEYIAAILELSALVVKRNEQLL---------LHMDLLYRLTP 251

  Fly   244 ED---------VHQFFMRLVND---TI-------ALRERENFKRNDFMNLLIELKQKGRVTLDNG 289
            :.         ||.|...::.:   |:       .::.:...|..||:::|:..|.      ::|
  Rat   252 DGRRFYKACHLVHDFTYAVIQERRRTLPKHGGDDVIKAKAKSKTLDFIDVLLLSKD------EDG 310

  Fly   290 EVIEGMDIGELAAQVFVFYVAGFETSSSTMSYCLYELAQNQDIQDRLRNEIQTVLEEQEG-QLTY 353
            :.:...||   .|:...|...|.:|::|.:|:.||.||::.:.|:|.|.|:|.:|.:::. ::.:
  Rat   311 KELSDEDI---RAEADTFMFEGHDTTASGLSWILYNLAKHPEYQERCRQEVQELLRDRDSEEIEW 372

  Fly   354 ESIKAMTYLNQVISETLRLYTLVPHLERKALNDYVVPGHEKLVIEKGTQVIIPACAYHRDEDLYP 418
            :.:..:.:|...|.|:|||:..|..:.|....|..:|  :..||.||...||...|.|.:..::.
  Rat   373 DDLAQLPFLTMCIKESLRLHPPVTMVSRCCTQDISLP--DGRVIPKGIICIINIFATHHNPTVWQ 435

  Fly   419 NPETFDPERFSPEKVAARESVEWLPFGDGPRNCIGMRFGQMQARIGLAQIISRFRVSVCDTTEIP 483
            :||.:||.||.||.:.||..:.::||..|||||||..|...:.::.:|..:.||||       :|
  Rat   436 DPEVYDPFRFDPENIQARSPLAFIPFSAGPRNCIGQTFAMNEMKVAVALTLLRFRV-------LP 493

  Fly   484 LKYSPM---SIVLGTVGGIYLRVE 504
            ....|.   .::|....|::||||
  Rat   494 DDKEPRRKPELILRAEDGLWLRVE 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6a2NP_523628.1 CYP6-like 69..500 CDD:410679 102/408 (25%)
Cyp4f40NP_001102830.1 CYP4F 74..515 CDD:410772 102/410 (25%)

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