DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6a2 and Cyp4a12a

DIOPT Version :9

Sequence 1:NP_523628.1 Gene:Cyp6a2 / 35587 FlyBaseID:FBgn0000473 Length:506 Species:Drosophila melanogaster
Sequence 2:NP_803125.2 Gene:Cyp4a12a / 277753 MGIID:88612 Length:508 Species:Mus musculus


Alignment Length:553 Identity:143/553 - (25%)
Similarity:237/553 - (42%) Gaps:118/553 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VLIYLLIAISSLLAYLYHRNFNYWNRRGVPHDAPHPLYGNMVGFRKNRVMHDFFYDYYNKYRKSG 67
            ||..||:...:...|| ||.:...:.:..|....|.|:|:.:  .|::.:.|..      .|...
Mouse    24 VLSLLLLLFKTAQLYL-HRQWLLSSTQQFPSPPSHWLFGHKI--LKDQDLQDIL------TRIKN 79

  Fly    68 FPFVGFYFL--HKPAAFIVDTQLAKNILIKDFSNFADRGQFHNGRDDP------------LTQHL 118
            ||.....:|  .|....:.|....|.||               ||.||            :.:.|
Mouse    80 FPSACPQWLWGSKVRIQVYDPDYMKLIL---------------GRSDPKANGSYRFLAPWIGRGL 129

  Fly   119 FNLDGKKWKDMRQRLTPTFTSGKMKFMFPTVIKVSEEFVKVIT---EQVPAAQNGAVLEIKELMA 180
            ..|||:.|...|:.|||.|....:|    ...::..:.|:|:.   ||:  ....:.|||...:.
Mouse   130 LMLDGQTWFQHRRMLTPAFHYDILK----PYTEIMADSVRVMLDKWEQI--VGQDSTLEIFRHIT 188

  Fly   181 RFTTDVIGTCAFGIECNT-----LRTPVSDFRTMGQKVFTDMRHGKLLTMFVF------------ 228
            ..|.|.|..|||..|.:.     .::.:.....:...||:.:|:       :|            
Mouse   189 LMTLDTIMKCAFSHEGSVQLDRKYKSYIQAVEDLNDLVFSRVRN-------IFHQNDIIYRVSSN 246

  Fly   229 -----SFPKLA---------SRLRMRMMPEDVHQFFMRLVNDTIALRERENFKRNDFMNLLIELK 279
                 |..|||         || |:::..|:             .|.:.:..:|.||:::|:..:
Mouse   247 GCKANSACKLAHDHTDQVIKSR-RIQLQDEE-------------ELEKLKKKRRLDFLDILLFAR 297

  Fly   280 QKGRVTLDNGEVIEGMDIGELAAQVFVFYVAGFETSSSTMSYCLYELAQNQDIQDRLRNEIQTVL 344
                  ::||:.:...|   |.|:|..|...|.:|::|.:|:..|.||.|.:.|.|.|.|||::|
Mouse   298 ------MENGKSLSDKD---LRAEVDTFMFEGHDTTASGISWIFYALATNPEHQQRCRKEIQSLL 353

  Fly   345 EEQEGQLTYESIKAMTYLNQVISETLRLYTLVPHLERKALNDYVVPGHEKLVIEKGTQVIIPACA 409
            .:.. .:|:..:..|.|....|.|.||:|..||.:.|:..:....|....|  .||..|::....
Mouse   354 GDGT-SITWNDLDKMPYTTMCIKEALRIYPPVPSVSRELSSPVTFPDGRSL--PKGIHVMLSFYG 415

  Fly   410 YHRDEDLYPNPETFDPERFSPEKVAARESVEWLPFGDGPRNCIGMRFGQMQARIGLAQIISRFRV 474
            .|.:..::||||.|||.||:|.  ::|.|..:|||..|.|||||.:|...:.::.:|..:.||.:
Mouse   416 LHHNPTVWPNPEVFDPSRFAPG--SSRHSHSFLPFSGGARNCIGKQFAMNELKVAVALTLLRFEL 478

  Fly   475 SVCDTTEIPLKYSPM-SIVLGTVGGIYLRVERI 506
             :.|.|.:|:   |: .|||.:..||:|.::::
Mouse   479 -LPDPTRVPI---PIPRIVLKSKNGIHLHLKKL 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6a2NP_523628.1 p450 36..502 CDD:278495 133/514 (26%)
Cyp4a12aNP_803125.2 p450 52..502 CDD:278495 134/517 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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