DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6a2 and Cyp4a8

DIOPT Version :9

Sequence 1:NP_523628.1 Gene:Cyp6a2 / 35587 FlyBaseID:FBgn0000473 Length:506 Species:Drosophila melanogaster
Sequence 2:XP_038965258.1 Gene:Cyp4a8 / 266674 RGDID:628846 Length:510 Species:Rattus norvegicus


Alignment Length:533 Identity:136/533 - (25%)
Similarity:230/533 - (43%) Gaps:76/533 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VLIYLLIAISSLLAYLYHRNFNYWNRRGV---PHDAPHPLYGNMVGFRKNRVMHDFFYDYYNKYR 64
            ||..||:...:...||:.|    |..|..   |....|..:|:.:.|..::...|..      .|
  Rat    24 VLTVLLLLFKTAQFYLHRR----WLLRATQQFPSPPSHWFFGHKLSFLVDQEFQDIL------TR 78

  Fly    65 KSGFPFVGFYFLHKPAAFIVDTQLAKNILIKDFSNFADRGQFHNGRDDPLTQH------------ 117
            ...||.....:|           ...|:.|:.:.  .|..:...||.||.:.|            
  Rat    79 VKNFPSACPQWL-----------WGSNVRIQVYD--PDYMKLILGRSDPKSHHSYRFLAPWIGYG 130

  Fly   118 LFNLDGKKWKDMRQRLTPTFTSGKMKFMFPTVIKVSEEFVKVIT---EQVPAAQNGAVLEIKELM 179
            |..|:|:.|...|:.|||.|....:|    ..:.:..:.|:::.   ||:  ....:.|||.:.:
  Rat   131 LLLLNGQTWFQHRRMLTPAFHYDTLK----PYVGIMADSVRIMLDKWEQI--VGQDSTLEIFQHI 189

  Fly   180 ARFTTDVIGTCAFGIECNT-----LRTPVSDFRTMGQKVFTDMRHGKLLTMFVFSFPKLASRLR- 238
            ...|.|.|..|||..|.:.     .::.:.....:....|..:|:.......::|......:.| 
  Rat   190 TLMTLDTIMKCAFSQEGSVQLDRKYKSYIKAVEDLNNLSFFRIRNIFHQNDIIYSLSSNGRKARS 254

  Fly   239 -MRMMPEDVHQFF---MRLVNDTIALRERENFKRNDFMNLLIELKQKGRVTLDNGEVIEGMDIGE 299
             .::..|...|..   ...:.|...|::.:..:|.||:::|:..:      ::||..:...|   
  Rat   255 AWQLAHEHTDQVIKSRKAQLQDEEELQKVKQKRRLDFLDILLFAR------IENGSSLSDKD--- 310

  Fly   300 LAAQVFVFYVAGFETSSSTMSYCLYELAQNQDIQDRLRNEIQTVLEEQEGQLTYESIKAMTYLNQ 364
            |.|:|..|...|.:|::|.:|:..|.||.|.:.|...|.|||::|.: ...:|::.:..|.|...
  Rat   311 LRAEVDTFMFEGHDTTASGISWIFYALATNPEHQQGCRKEIQSLLGD-GASITWDDLDKMPYTTM 374

  Fly   365 VISETLRLYTLVPHLERKALNDYVVPGHEKLVIEKGTQVIIPACAYHRDEDLYPNPETFDPERFS 429
            .|.|.||:|..|..:.|........|....|  .||..|::.....|.:..::||||.|||.||:
  Rat   375 CIKEALRIYPPVTAVSRMLSTPVTFPDGRSL--PKGITVMLSFYGLHHNPTVWPNPEVFDPYRFA 437

  Fly   430 PEKVAARESVEWLPFGDGPRNCIGMRFGQMQARIGLAQIISRFRVSVCDTTEIPLKYSPM-SIVL 493
            ||  ::|.|..:|||..|.|||||.:|...:.::.:|..:.||.: :.|.|.||:   |: .:||
  Rat   438 PE--SSRHSHSFLPFSGGARNCIGKQFAMNELKVAVALTLLRFEL-LPDPTRIPI---PIPRLVL 496

  Fly   494 GTVGGIYLRVERI 506
            .:..|||||::::
  Rat   497 KSKNGIYLRLKKL 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6a2NP_523628.1 p450 36..502 CDD:278495 124/491 (25%)
Cyp4a8XP_038965258.1 CYP4B-like 72..505 CDD:410771 121/475 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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