DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6a2 and Cyp26a1

DIOPT Version :10

Sequence 1:NP_523628.1 Gene:Cyp6a2 / 35587 FlyBaseID:FBgn0000473 Length:506 Species:Drosophila melanogaster
Sequence 2:NP_569092.2 Gene:Cyp26a1 / 154985 RGDID:620161 Length:497 Species:Rattus norvegicus


Alignment Length:461 Identity:105/461 - (22%)
Similarity:173/461 - (37%) Gaps:111/461 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 KYRKSGFPFVGFYFLH---KPAAFIVDTQLAKNILIKDFSNFADRGQFHNGRDDPLTQH------ 117
            |.||.||    .|..|   :|...::.....:.||:              |....::.|      
  Rat    71 KRRKYGF----IYKTHLFGRPTVRVMGADNVRRILL--------------GEHRLVSVHWPASVR 117

  Fly   118 -------LFNLDGKKWKDMRQRLTPTFTSGKMKFMFPTVIKVSEEFVKVITEQVPAAQNGAVL-- 173
                   |.||.....|..::.:...|....::...|.   ::||....:.:.:...:.|.::  
  Rat   118 TILGAGCLSNLHDSSHKQRKKVIMQAFNREALQCYVPV---IAEEVSGCLEQWLSCGERGLLVYP 179

  Fly   174 EIKELMARFTTDVIGTCAFGIECNTLRTPVSDFRTMGQKV--FTDMRHGKLLTMFVFSFP----- 231
            |:|.||.|....::..|..|        |........|.|  |.:|      |..:||.|     
  Rat   180 EVKRLMFRIAMRILLGCEPG--------PAGGGEDEQQLVEAFEEM------TRNLFSLPIDVPF 230

  Fly   232 -KLASRLRMRMMPEDVHQFFMRLVNDTIALRERENFKR----------NDFMNLLIELK-QKGRV 284
             .|...::.|           .|::..|....|...:|          .|.:.||||.. ::|  
  Rat   231 SGLYRGVKAR-----------NLIHARIEENIRAKIRRLQAAEPDAGCKDALQLLIEHSWERG-- 282

  Fly   285 TLDNGEVIEGMDIGELAAQVFVFYVAGFETSSSTMSYCLYELAQNQDIQDRLRNEIQT----VLE 345
                    |.:|:..|..........|.||::|..:..:..|.....:..::|.||::    ...
  Rat   283 --------ERLDMQALKQSSTELLFGGHETTASAATSLITYLGLYPHVLQKVREEIKSKGLLCKS 339

  Fly   346 EQEGQLTYESIKAMTYLNQVISETLRLYTLVPHLERKALNDYVVPGHEKLVIEKGTQVIIPACAY 410
            ..|.:|..|:::.:.|:..||.|||||...||...|.||..:.:.|::   |.||..||...|..
  Rat   340 HHEDKLDMETLEQLKYIGCVIKETLRLNPPVPGGFRVALKTFELNGYQ---IPKGWNVIYSICDT 401

  Fly   411 HRDEDLYPNPETFDPERFS---PEKVAARESVEWLPFGDGPRNCIGMRFGQMQARIGLAQIISRF 472
            |...|.:.|.|.|:|:||:   ||..:   ...::|||.|.|:|:|..|.::..:|...::..| 
  Rat   402 HDVADSFTNKEEFNPDRFTSLHPEDTS---RFSFIPFGGGLRSCVGKEFAKILLKIFTVELARR- 462

  Fly   473 RVSVCD 478
                ||
  Rat   463 ----CD 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6a2NP_523628.1 CYP6-like 69..500 CDD:410679 100/454 (22%)
Cyp26a1NP_569092.2 cytochrome_P450 55..490 CDD:477761 105/461 (23%)

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