DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Zip42C.2 and zipt-3

DIOPT Version :9

Sequence 1:NP_610231.2 Gene:Zip42C.2 / 35580 FlyBaseID:FBgn0033097 Length:310 Species:Drosophila melanogaster
Sequence 2:NP_495126.1 Gene:zipt-3 / 173969 WormBaseID:WBGene00015940 Length:363 Species:Caenorhabditis elegans


Alignment Length:400 Identity:68/400 - (17%)
Similarity:135/400 - (33%) Gaps:154/400 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 VDQHLIVAKIVAIVVLFLVTLIFCFIPYLLDRFYKWTQRPENNAREFKVVLCLLN-------FGG 59
            ::|.|.:.  .:...:|::.||...|||...|                  .|.:|       |.|
 Worm     1 MEQFLFMT--TSAFAVFILLLISTSIPYTFLR------------------TCCVNASKTSISFLG 45

  Fly    60 ----GVLIATTFIHMLPEVVEVVNALQDCRMLAPTPFGLP--EVLLCTGFYLMYCIEETMHFV-- 116
                ||.|||.|:.::|.|......|:..:.:..:...:|  :.|:..||.::...|:.:|.:  
 Worm    46 CASCGVFIATCFLGLVPHVRHQEMHLRGNQTIVDSYGWIPSTDQLVIIGFLIILITEQIIHGIGH 110

  Fly   117 -------------------VRRRQQRKLRE------VVTIKDAGEELRTEIVVQPEESPKE--PN 154
                               ::..:.....|      :|.:.|..:    ||:.:...||..  |:
 Worm   111 SIGNGHSHSGHSPLATSDSIKMNKFHDEEEGEDHVPLVAMDDDAD----EIIFRQNTSPHHHAPS 171

  Fly   155 ----------------WLRGLGIIVALSLHELFGGMAIGLEMSVSTVWFMTGAISVHKLVLAFCI 203
                            |.    :::.:|:|..|.|:|:|::...:..|.:..|:..|:::.....
 Worm   172 SGHCRTAPGGSMNIRVWF----LLLGMSVHSFFEGVALGVQNDSNAFWQILIAVLFHEVLCCVSY 232

  Fly   204 GMEIMMAHTRWLLAVVYLLVFSIVTPIGVGIGIAVSESAAANQPSTVSGI------------LQG 256
            |:::...:.....|....:..|...|.|:.:.            :|:.||            |:|
 Worm   233 GVQLAKHNASRKYAWTSSIFLSATIPAGMILA------------TTIDGIENDMWQRIGRYWLEG 285

  Fly   257 LACGTLIYVVFFEIVA---------------------------KNHA-----------------G 277
            ||.||.::|...|::.                           .||:                 |
 Worm   286 LAAGTFVHVALVELLPMELHSDDSGEGGHGHSHNVIADTTHSHSNHSSSHWISLVKSLFVAAGIG 350

  Fly   278 IRILLSSMVG 287
            |.:::.|::|
 Worm   351 IFVIIKSLIG 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zip42C.2NP_610231.2 Zip 9..294 CDD:280666 65/392 (17%)
zipt-3NP_495126.1 Zip 4..355 CDD:280666 65/390 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1558
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D471714at33208
OrthoFinder 1 1.000 - - FOG0000574
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.780

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