DRSC/TRiP Functional Genomics Resources

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Protein Alignment chk and slc16a5b

DIOPT Version :9

Sequence 1:NP_001163063.1 Gene:chk / 35578 FlyBaseID:FBgn0033095 Length:894 Species:Drosophila melanogaster
Sequence 2:XP_001919658.1 Gene:slc16a5b / 794371 ZFINID:ZDB-GENE-131120-181 Length:547 Species:Danio rerio


Alignment Length:805 Identity:149/805 - (18%)
Similarity:256/805 - (31%) Gaps:379/805 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 RKRLISNESGDSIDSSSTEKKTPKM----------------------------PDGGYGWVVVFA 144
            |.|..|.::.::.|::|.:.:.|..                            ||||:|||||.|
Zfish    18 RSRASSLQAFENADTASCKSEEPDQEEEEEQSSSTLPEERHCSTGGQANAQLAPDGGWGWVVVAA 82

  Fly   145 SLVVSLIADGLSFSFGLINVELLEYFGESTSKTAWISSLFFSVPLLMGPIWSNLVDKYGCRKMTI 209
            :::|..:........|:...||...|..|.::|:|:.::..:|....|||.|.||::.|||...|
Zfish    83 TILVLAMTLAFPSCIGIFYTELQSDFQASNTETSWVPAIMMAVLHACGPICSVLVERCGCRATII 147

  Fly   210 LGGVVSAFGFALSSFCNSIEMLMVTFGIISGLGLGIGYVTAVVSIAFWFDKKRTFATGIGASGTG 274
            :||::|..|.|.|||..::..|.:|.|||:|:|..:.:..::..:..:|.::|.||..:.::||.
Zfish   148 IGGILSGLGMAASSFAQTMVELYITAGIITGMGFSLCFQPSITMVGHYFVRRRAFANALSSTGTA 212

  Fly   275 IGTFVYARLTSYLIESYGWRGATLILGGTMLNACVCGALMRDPDWLIEENRLESRSQSVTTFSNS 339
            :|..:...|.:||:.::||||:.|:|||.:||.|||||:||                        
Zfish   213 LGLSILPLLANYLLRNFGWRGSFLVLGGVLLNCCVCGAVMR------------------------ 253

  Fly   340 SVCLEEIKKLLDTGITKEAVLDSLVTKNNTEANQQIDDPLDSALKRYRSEIFLPTFLSTQELDSI 404
                                  .|..|..||.                                 
Zfish   254 ----------------------PLAAKPKTET--------------------------------- 263

  Fly   405 CEVKSLSRRSLRHKEGEEAPSRENLLSMSSGAGAYPPSTAVIGSPDDTLMGGIAHEAAEEAKKAY 469
                       |.||.:....:.|.||:                          |:..:...:|.
Zfish   264 -----------RTKETDNHHLKTNCLSV--------------------------HQGLKGRLRAT 291

  Fly   470 LASIETLSPSEKRSTGRTPNGSLRSSDEGYLTQKHASSRYSLNENIFMAKHTTPSISNLKVNGLR 534
            |::|.|.               ||                                        |
Zfish   292 LSTIMTF---------------LR----------------------------------------R 301

  Fly   535 HNSVDILSEDMHCYYSKDETFALLEPSRRIRPTVIAIPEQEQSVNSELATRRARLDSITGIRRLS 599
            |.:.|:|                                                          
Zfish   302 HMAFDLL---------------------------------------------------------- 308

  Fly   600 RSKKPSHHRSNLRRNISIRNSNFLKDMRIHRNSIHYRGAMLNTHRYRLRASSCPNIYRNSMTTIA 664
                                                                |.|.|        
Zfish   309 ----------------------------------------------------CSNPY-------- 313

  Fly   665 KEEEDTWYDNFVDTMKSIFDFSLFLDMKFALFNLSTLFLFIWFIIPYLYLPDYMKQYKYDVSQSA 729
                                        |..:.|...::.:.|::|.:||..|...|..:..|:|
Zfish   314 ----------------------------FCAYALGVSWMMLGFVVPLVYLVPYATAYGMEQDQAA 350

  Fly   730 ELISDVGIAQTV---------------GMIGLGYLGDLSWMNINICYSLCMLVCGASVFFMPLLI 779
            .|::.:|:...:               |.....||..:: :.||   .|...|||..        
Zfish   351 LLMAILGLINIIVRPATAIVFGLPRFRGSHNFAYLFAIA-VVIN---GLSNCVCGIG-------- 403

  Fly   780 TNYMGLMVMCVIFGFTFASSFSFTPSILVSIVDLDDFTCAYGLVLLVQGVGMIAGPPIAGVIYEY 844
            |:::.|:|..::|||:.:...|...::|:..|::..|..|.||:.:::.:.::.|||:||::.:.
Zfish   404 TSFLVLLVYVILFGFSMSLVGSLLFTVLMDTVEMSRFPSALGLISIMESIMLLLGPPLAGILVDS 468

  Fly   845 TGRWDDTFY-------YAGIFIALS 862
            ||::...|:       .||:||.||
Zfish   469 TGQYIYVFFACSVTGSTAGLFIMLS 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chkNP_001163063.1 MFS 143..>315 CDD:119392 60/171 (35%)
MFS <685..869 CDD:119392 48/200 (24%)
slc16a5bXP_001919658.1 2A0111 71..511 CDD:331689 143/752 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - otm25394
orthoMCL 1 0.900 - - OOG6_109654
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.810

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