DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment chk and slc16a7

DIOPT Version :9

Sequence 1:NP_001163063.1 Gene:chk / 35578 FlyBaseID:FBgn0033095 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_001032485.1 Gene:slc16a7 / 641419 ZFINID:ZDB-GENE-051113-248 Length:465 Species:Danio rerio


Alignment Length:775 Identity:142/775 - (18%)
Similarity:224/775 - (28%) Gaps:362/775 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 TPKMPDGGYGWVVVFASLVVSLIADGLSFSF----GLINVELLEYFGESTSKTAWISSLFFSVPL 189
            ||  ||||:||.|||.    |.|:.|.|::|    .:...|:.|||..|.|:.||:||:..:...
Zfish    12 TP--PDGGWGWAVVFG----SFISIGFSYAFPKSLTIYFKEIQEYFSISYSQIAWVSSIMLATMY 70

  Fly   190 LMGPIWSNLVDKYGCRKMTILGGVVSAFGFALSSFCNSIEMLMVTFGIISGLGLGIGYVTAVVSI 254
            ..||:.|.||::||.|.:.|.||::.......:||..||..|.:..|:|.|.||......|:..|
Zfish    71 AGGPVSSILVNRYGSRPVVIAGGLMVGVAMVTASFGTSILHLYLCVGVIGGFGLAFDLQPALTII 135

  Fly   255 AFWFDKKRTFATGIGASGTGIGTFVYARLTSYLIESYGWRGATLILGGTMLNACVCGALMRDPDW 319
            ..:|..||..|.||..:|:.:.....|.:..:|.:.:||||:..||||.:.|.||.|:|||    
Zfish   136 GKYFLVKRPMANGIAMAGSPVFLSTLAPVNQFLFDQFGWRGSFFILGGVLFNCCVAGSLMR---- 196

  Fly   320 LIEENRLESRSQSVTTFSNSSVCLEEIKKLLDTGITKEAVLDSLVTKNNTEANQQIDDPLDSALK 384
                                                                             
Zfish   197 ----------------------------------------------------------------- 196

  Fly   385 RYRSEIFLPTFLSTQELDSICEVKSLSRRSLRHKEGEEAPSRENLLSMSSGAGAYPPSTAVIGSP 449
                .|.:|...:|:  |:|                                   .|.||   ..
Zfish   197 ----PIKIPVSKTTE--DNI-----------------------------------SPQTA---GQ 217

  Fly   450 DDTLMGGIAHEAAEEAKKAYLASIETLSPSEKRSTGRTPNGSLRSSDEGYLTQKHASSRYSLNEN 514
            ||:                                                              
Zfish   218 DDS-------------------------------------------------------------- 220

  Fly   515 IFMAKHTTPSISNLKVNGLRHNSVDILSEDMHCYYSKDETFALLEPSRRIRPTVIAIPEQEQSVN 579
                                                                             
Zfish   221 ----------------------------------------------------------------- 220

  Fly   580 SELATRRARLDSITGIRRLSRSKKPSHHRSNLRRNISIRNSNFLKDMRIHRNSIHYRGAMLNTHR 644
                                   |||...|.|.:.|                             
Zfish   221 -----------------------KPSGCSSKLNQFI----------------------------- 233

  Fly   645 YRLRASSCPNIYRNSMTTIAKEEEDTWYDNFVDTMKSIFDFSLFLDMKFALFNLSTLFLFIWFII 709
                                                   |.|||....|.::.:..:.:|..|..
Zfish   234 ---------------------------------------DISLFKHRGFLIYLVGNVLMFFGFFA 259

  Fly   710 PYLYLPDYMKQYKYDVSQSAELISDVGIAQTVGMIGLGYLGDLSWMNINICY---------SLCM 765
            |.::|..|.|....|...:|.|:|...:.......|.|.:.:..|:...|.|         .||.
Zfish   260 PVVFLAPYAKHQGVDEYSAAFLLSIFALVDMFARPGTGLVANTKWIRPKIQYFFSFAVTYNGLCH 324

  Fly   766 LVCGASVFFMPLLITNYMGLMVMCVIFGFTFASSFSFTPSILVSIVDLDDFTCAYGLVLLVQGVG 830
            |:|       ||| ..|:||:|..|:||..|....:....:|:.:|....|:.|.||..:::...
Zfish   325 LMC-------PLL-PGYIGLVVYAVLFGLAFGMVCALLFEVLMDLVGAQRFSSAVGLATIIECGP 381

  Fly   831 MIAGPPIAGVIYEYTGRWDDTFYYAGIFIALSGVCSYLIEFCE----KKAPKESDSDVLE 886
            ::.||||:|::.:....:...::..|:.:...||..:::.:..    ||..|:.:::.|:
Zfish   382 VLLGPPISGLLVDIFMDYKYMYFACGMMMLAGGVFLFIMNYYNYRWLKKEEKQRNAEELQ 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chkNP_001163063.1 MFS 143..>315 CDD:119392 61/175 (35%)
MFS <685..869 CDD:119392 48/192 (25%)
slc16a7NP_001032485.1 2A0113 1..440 CDD:273325 141/772 (18%)
MFS 20..420 CDD:119392 131/742 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - otm25394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.910

Return to query results.
Submit another query.