DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment chk and zgc:114041

DIOPT Version :9

Sequence 1:NP_001163063.1 Gene:chk / 35578 FlyBaseID:FBgn0033095 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_001025143.1 Gene:zgc:114041 / 574425 ZFINID:ZDB-GENE-050706-122 Length:433 Species:Danio rerio


Alignment Length:756 Identity:143/756 - (18%)
Similarity:230/756 - (30%) Gaps:346/756 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 PDGGYGWVVVFASLVVSLIADGLSFSFGLINVELLEYFGESTSKTAWISSLFFSVPLLMGPIWSN 197
            ||||||||||.::..:..:...:..:|||..:||..|:...||.|:.::|...:|..|..|:.|.
Zfish     9 PDGGYGWVVVASAFFIMGLTAAVLKNFGLFFLELQNYYSVLTSTTSLMTSTTIAVFHLGSPLASA 73

  Fly   198 LVDKYGCRKMTILGGVVSAFGFALSSFCNSIEMLMVTFGIISGLGLGIGYVTAVVSIAFWFDKKR 262
            |......|.:.::||:::|.|..::|...|:..:.::.|:|.|||:...:|.|...:..:|.:.|
Zfish    74 LSMHLSQRPVIMVGGLLAASGMIIASLGLSLPWMYLSVGVIQGLGVSFTWVPANSMVNHYFKRWR 138

  Fly   263 TFATGIGASGTGIGTFVYARLTSYLIESYGWRGATLILGGTMLNACVCGALMRDPDWLIEENRLE 327
            ..|..|.:||..:....::....:|||||.||||.|::||..||..||||||             
Zfish   139 PIACAISSSGECVFGMAFSPFFQWLIESYSWRGALLVIGGLQLNLIVCGALM------------- 190

  Fly   328 SRSQSVTTFSNSSVCLEEIKKLLDTGITKEAVLDSLVTKNNTEANQQIDDPLDSALKRYRSEIFL 392
                               |.|.....:::|||||                              
Zfish   191 -------------------KPLQPVQTSRKAVLDS------------------------------ 206

  Fly   393 PTFLSTQELDSICEVKSLSRRSLRHKEGEEAPSRENLLSMSSGAGAYPPSTAVIGSPDDTLMGGI 457
                                     |||                                     
Zfish   207 -------------------------KEG------------------------------------- 209

  Fly   458 AHEAAEEAKKAYLASIETLSPSEKRSTGRTPNGSLRSSDEGYLTQKHASSRYSLNENIFMAKHTT 522
                                      ||.                                    
Zfish   210 --------------------------TGT------------------------------------ 212

  Fly   523 PSISNLKVNGLRHNSVDILSEDMHCYYSKDETFALLEPSRRIRPTVIAIPEQEQSVNSELATRRA 587
                                       ||..||         :.::|..||              
Zfish   213 ---------------------------SKKVTF---------QCSLIQRPE-------------- 227

  Fly   588 RLDSITGIRRLSRSKKPSHHRSNLRRNISIRNSNFLKDMRIHRNSIHYRGAMLNTHRYRLRASSC 652
                                                                             
Zfish   228 ----------------------------------------------------------------- 227

  Fly   653 PNIYRNSMTTIAKEEEDTWYDNFVDTMKSIFDFSLFLDMKFALFNLSTLFLFIWFIIPYLYLPDY 717
                                              |.|.:.||:|..:      .|.||.|:|..|
Zfish   228 ----------------------------------LLLYIVFAIFAAA------GFFIPPLFLVPY 252

  Fly   718 MKQYKYDVSQSAELISDVGIAQTVGMIGLGYLGDLSWM-NINICYSLCMLVCGASVFFMPLLIT- 780
            :.....|...:|.|:|.:.:|..:|.:|.|:|.:|..: |:.:   |.|:.....|..:.|.|. 
Zfish   253 VNNLGMDQYWAASLLSVLSLADLLGRLGCGWLANLCLLRNLQL---LTMVATAMGVVLLLLPIAY 314

  Fly   781 NYMGLMVMCVIFGFTFASSFSFTPSILVSIVDLDDFTCAYGLVLLVQGVGMIAGPPIAGVIYEYT 845
            .|..::|...::||.|....:...:.:|.||.|:.|..|.||.:|::.:|...|||.||.:.::|
Zfish   315 GYWSVLVFTSLYGFLFGCVVAIHVTSIVDIVGLEGFDSALGLFMLLRSIGGFLGPPAAGWLVDWT 379

  Fly   846 GRWDDTFYYAGIFIALSGVCSYLIEFCEKKAPKESDSDVLE 886
            ..:...||.:||.:.|||....|:::..:|..|:...:.|:
Zfish   380 HNFGAAFYLSGICLLLSGCFVVLVDWLVEKKKKKKLQETLQ 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chkNP_001163063.1 MFS 143..>315 CDD:119392 54/171 (32%)
MFS <685..869 CDD:119392 55/185 (30%)
zgc:114041NP_001025143.1 2A0111 15..396 CDD:273323 130/724 (18%)
MFS 18..403 CDD:119392 130/728 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - otm25394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.910

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