DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment chk and slc16a4

DIOPT Version :9

Sequence 1:NP_001163063.1 Gene:chk / 35578 FlyBaseID:FBgn0033095 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_001074068.2 Gene:slc16a4 / 567144 ZFINID:ZDB-GENE-070112-602 Length:558 Species:Danio rerio


Alignment Length:829 Identity:174/829 - (20%)
Similarity:285/829 - (34%) Gaps:291/829 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 LSVEELADGAGHSRVVRSSVIELEDGTMTCLMNGNGQVKRRKRLISNESGDSIDSSSTEKKTPKM 132
            |..|:.:||    :..::...||:...|.         |.:|:::..|.                
Zfish     2 LPKEQHSDG----KTAKTPCSELKAKVMK---------KEKKKVVYREP---------------- 37

  Fly   133 PDGGYGWVVVFASLVVSLIADGLSFSFGLINVELLEYFGESTSKTAWISSLFFSVPLLMGPIWSN 197
            ||||:||:||....:|:::..|...:||:..|.|.:.||.|:...:||.|:..|:.|..||:.|.
Zfish    38 PDGGWGWMVVLHCFLVNVLVMGTLKTFGIFFVALQDEFGGSSESISWIGSIMSSLRLSGGPLASV 102

  Fly   198 LVDKYGCRKMTILGGVVSAFGFALSSFCNSIEMLMVTFGIISGLGLGIGYVTAVVSIAFWFDKKR 262
            ...|.|.|..:|:|.:..:.||..|.|..|:..|.::.|::.|||..:.|....|.|..:|.|:.
Zfish   103 ACAKLGNRVTSIVGALFVSAGFLFSIFATSVTYLYISMGLVVGLGFALLYQATSVVIVTYFRKRL 167

  Fly   263 TFATGIGASGTGIGTFVYARLTSYLIESYGWRGATLILGGTMLNACVCGALMRDPDWLIEENRLE 327
            ..|..||.||.|: ||..|..|..|::.|.|:||.|||||.|||....|.|:|            
Zfish   168 ATAYSIGRSGMGL-TFALAPFTQLLLDQYAWQGALLILGGLMLNLVASGMLLR------------ 219

  Fly   328 SRSQSVTTFSNSSVCLEEIKKLLDTGITKEAVLDSLVTKNNTEANQQIDDPLDSALKRYRSEIFL 392
                                                              |:             
Zfish   220 --------------------------------------------------PI------------- 221

  Fly   393 PTFLSTQELDSICEVKSLSRRSLRHKEGEEAPSRENLLSMSSGAGAYPPSTAVIGSPDDTLMGGI 457
                                 ::||.                   |.|.|.:.|           
Zfish   222 ---------------------NIRHP-------------------ASPISNSTI----------- 235

  Fly   458 AHEAAEEAKKAYLASIETLSPSEKRSTGRTP--NGSLRSSDEGYLTQKHASSRYSLNENIFMAKH 520
             |:..::             |.:....|.||  ||:.:|.                         
Zfish   236 -HKTEKD-------------PLKNNMNGNTPVANGTSKSD------------------------- 261

  Fly   521 TTPSISNLKVNGLRHNSVDILSEDMHCYYSKDETFALLEPSRRIRPTVIAIPEQEQSVNSELATR 585
            ::|.|         |....|:...:|                          ||....:.:|   
Zfish   262 SSPPI---------HKDTLIIKNPVH--------------------------EQNSLPHLDL--- 288

  Fly   586 RARLDSITGIRRLSRSKKPSHHRSNLRRNISIRNSNFLKDMRIHRNSIHYRGAMLNTHRYRLRAS 650
                            |||:.:..|...:...:.|..:..:                       |
Zfish   289 ----------------KKPTQNGVNGTDSSQTKTSPEMNGV-----------------------S 314

  Fly   651 SCPNIYRNSMTTIAKEEEDTWYDNFVDTMKSIFDFSLFLDMKFALFNLSTLFLFIWFIIPYLYLP 715
            ...::..|..|           :|..:....:.||||..:..|.::..|.:|..:.:.|||.:|.
Zfish   315 PVDSLLENGRT-----------ENVPENSPKVLDFSLLKNPFFCIYTWSLVFSQLAYFIPYFHLS 368

  Fly   716 DYMKQYKYDVSQSAELISDVGIAQTVGMIGLGYLGDLSWMNINICYSLCMLVCGASVFFMPLLIT 780
            ...:....|...::.:||..||.:||..:..|::.|.:.::....:...:::||......| |.|
Zfish   369 ARARNLGIDPMDASFIISVAGITETVAQLASGWVTDRNLVHKYHYHKAYLILCGVVNLLSP-LAT 432

  Fly   781 NYMGLMVMCVIFGFTFASSFSFTPSILVSIVDLDDFTCAYGLVLLVQGVGMIAGPPIAGVIYEYT 845
            :|:.|||..|.|........:....:||.:|..|....:.|..:...|:|.:.|||:||.:|:||
Zfish   433 SYILLMVYAVFFAIFCGGYMALLLPVLVDLVGADKLNNSMGFSMFFVGLGCLTGPPLAGFLYDYT 497

  Fly   846 GRWDDTFYYAGIFIALSGVCSYLIEFCEK-KAPKESDSDVLETKKAQLL 893
            ..:|.:||.||:...||.:..:|.....: :|.||.    |||...:|:
Zfish   498 QTYDCSFYLAGVCYLLSSISLFLEPLARRWQARKER----LETLNQELM 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chkNP_001163063.1 MFS 143..>315 CDD:119392 62/171 (36%)
MFS <685..869 CDD:119392 52/183 (28%)
slc16a4NP_001074068.2 2A0113 35..520 CDD:273325 157/755 (21%)
MFS 47..520 CDD:119392 149/727 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 290 1.000 Inparanoid score I2778
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4139
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
66.090

Return to query results.
Submit another query.