DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment chk and slc16a5a

DIOPT Version :9

Sequence 1:NP_001163063.1 Gene:chk / 35578 FlyBaseID:FBgn0033095 Length:894 Species:Drosophila melanogaster
Sequence 2:XP_021336012.1 Gene:slc16a5a / 565514 ZFINID:ZDB-GENE-121108-4 Length:506 Species:Danio rerio


Alignment Length:772 Identity:143/772 - (18%)
Similarity:239/772 - (30%) Gaps:349/772 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 ISNESGD--SIDSSSTEKKTP------------KMPDGGYGWVVVFASLVVSLIADGLSFSFGLI 162
            :..:||:  ..:|...||:.|            ..||||:||||:.|:::|  :|..|:|...:|
Zfish     9 MEEQSGELCEPESEELEKQGPGPPSNANAPDSYDAPDGGWGWVVLLATIIV--LALTLAFPSCII 71

  Fly   163 --NVELLEYFGESTSKTAWISSLFFSVPLLMGPIWSNLVDKYGCRKMTILGGVVSAFGFALSSFC 225
              .::|.:.|..:.|:|:|:.|:..:|....||:.|.|||::|||...:.|||:|.||.|:|||.
Zfish    72 IFYLDLQKEFEATNSQTSWVPSIMTAVLHAGGPLCSVLVDRFGCRATVMFGGVLSGFGMAVSSFS 136

  Fly   226 NSIEMLMVTFGIISGLGLGIGYVTAVVSIAFWFDKKRTFATGIGASGTGIGTFVYARLTSYLIES 290
            :||..|.:|.|:|:|||....:..||..:..:|.::|.||..:.::||.:|......|..:|...
Zfish   137 HSIVDLYITAGVITGLGFCFSFQPAVTILGHYFVRRRPFANAMSSTGTALGLSTLPFLCDFLKIE 201

  Fly   291 YGWRGATLILGGTMLNACVCGALMRDPDWLIEENRLESRSQSVTTFSNSSVCLEEIKKLLDTGIT 355
            .||||:.|:||..:||.|||||:||.                                       
Zfish   202 LGWRGSFLVLGAVLLNCCVCGAVMRP--------------------------------------- 227

  Fly   356 KEAVLDSLVTKNNTEANQQIDDPLDSALKRYRSEIFLPTFLSTQELDSICEVKSLSRRSLRHKEG 420
                                                                             
Zfish   228 ----------------------------------------------------------------- 227

  Fly   421 EEAPSRENLLSMSSGAGAYPPSTAVIGSPDDTLMGGIAHEAAEEAKKAYLASIETLSPSEKRSTG 485
                                                                             
Zfish   228 ----------------------------------------------------------------- 227

  Fly   486 RTPNGSLRSSDEGYLTQKHASSRYSLNENIFMAKHTTPSISNLKVNGLRHNSVDILSEDMHCYYS 550
                                                                             
Zfish   228 ----------------------------------------------------------------- 227

  Fly   551 KDETFALLEPSRRIRPTVIAIPEQEQSVNSELATRRARLDSITGIRRLSRSKKPSHHRSNLRRNI 615
                         |||                                   :||       |:..
Zfish   228 -------------IRP-----------------------------------RKP-------RKTN 237

  Fly   616 SIRNSNFLKDMRIHRNSIHYRGAMLNTHRYRLRASSCPNIYRNSMTTIAKEEEDTWYDNFVDTMK 680
            .|.||....|.         :|.||..         |.::                    ..:::
Zfish   238 EINNSPKTSDK---------KGCMLGI---------CQSL--------------------ASSLR 264

  Fly   681 SIFDFSLFL-DMKFALFNLSTLFLFIWFIIPYLYLPDYMKQYKYDVSQSAELISDVGIAQTVGMI 744
            ....|.||. :.:|.:|:|...::.:.|::|.:||..|......|.|::|.|:|.:|........
Zfish   265 QQMAFDLFCSNTRFRVFSLGITWMMLGFVVPLIYLVPYASADDMDPSRAALLLSILGFVNIFVRP 329

  Fly   745 GLGYLGDLSWMNINICY--SLCMLVCGASVFFMPLLITNYMGLMVMCVIFGFTFASSFSFTPSIL 807
            .:|.|..|.|......|  |..:|:.|.|.... .:..::..|:|..:.:|.:.:...|...::|
Zfish   330 PVGVLFSLPWFKGRHIYVFSAALLINGLSNSIC-CISASFPVLLVYVLTYGLSMSVVGSLMFTVL 393

  Fly   808 VSIVDLDDFTCAYGLVLLVQGVGMIAGPPIAGVIYEYTGRWDDTFYYAGIFIALSGV 864
            :..|::..|..|.||:.:::.|.::.|||:||.:.:.|..:...|....|.:.||.:
Zfish   394 MDTVEMSRFPSALGLLSIMESVTLLIGPPLAGFLVDRTQLYTYVFMACTIIVVLSAL 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chkNP_001163063.1 MFS 143..>315 CDD:119392 66/173 (38%)
MFS <685..869 CDD:119392 47/183 (26%)
slc16a5aXP_021336012.1 2A0111 38..457 CDD:331689 137/743 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - otm25394
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.810

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