DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment chk and slc16a6a

DIOPT Version :9

Sequence 1:NP_001163063.1 Gene:chk / 35578 FlyBaseID:FBgn0033095 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_001243761.1 Gene:slc16a6a / 564872 ZFINID:ZDB-GENE-110208-1 Length:495 Species:Danio rerio


Alignment Length:778 Identity:131/778 - (16%)
Similarity:248/778 - (31%) Gaps:324/778 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 KMPDGGYGWVVVFASLVVSLIADGLSFSFGLINVELLEYFGESTSKTAWISSLFFSVPLLMGPIW 195
            ::||||:||:|..|..:|.:...|:..|||:...:|:..|.|:.|:.:||.|:...|.....|:.
Zfish    19 EVPDGGWGWIVAVALFLVEVFTYGVIKSFGIFLKDLMSDFNETNSRVSWIISICVFVMTFTAPLS 83

  Fly   196 SNLVDKYGCRKMTILGGVVSAFGFALSSFCNSIEMLMVTFGIISGLGLGIGYVTAVVSIAFWFDK 260
            :.|.:::|.:.:.:.||.:.:.|...::|.:||..:.:|.||.:|||..:.::.....::.:|.:
Zfish    84 TMLSNRFGFQPVVMFGGFLISLGTISTAFTSSINQMYLTIGIATGLGYCLTFLPTATILSQYFSR 148

  Fly   261 KRTFATGIGASGTGIGTFVYARLTSYLIESYGWRGATLILGGTMLN-ACVCGALMRDPDWLIEEN 324
            :|:....:.::|....||.:|...:.| ::|..|..||::.||:.. ..:||||:|  ..:|:..
Zfish   149 RRSVVMAMASTGESFATFAFAPAFTAL-KNYIGRRYTLVVIGTLQGITIICGALLR--PIVIKPT 210

  Fly   325 RLESRSQSVTTFSNSSVCLEEIKKLLDTGITKEAVLDSLVTKNNTEANQQIDDPLDSALKRYRSE 389
            .|....|.:|    .::.:|:::....:|       ||:|                         
Zfish   211 SLTETEQKIT----YTLPVEQVQGFGSSG-------DSVV------------------------- 239

  Fly   390 IFLPTFLSTQELDSICEVKSLSRRSLRHKEGEEAPSRENLLSMSSGAGAYPPSTAVIGSPDDTLM 454
                                   :||..::|                                |.
Zfish   240 -----------------------QSLEQEQG--------------------------------LK 249

  Fly   455 GGIAHEAAEEAKKAYLASIETLSPSEKRSTGRTPNGSLRSSDEGYLTQKHASSRYSLNENIFMAK 519
            .||..|..|                                                        
Zfish   250 SGIELEEVE-------------------------------------------------------- 258

  Fly   520 HTTPSISNLKVNGLRHNSVDILSEDMHCYYSKDETFALLEPSRRIRPTVIAIPEQEQSVNSELAT 584
                                                          |..|.:.:|:         
Zfish   259 ----------------------------------------------PVQINLKQQD--------- 268

  Fly   585 RRARLDSITGIRRLSRSKKPSHHRSNLRRNISIRNSNFLKDMRIHRNSIHYRGAMLNTHRYRLRA 649
                                                                    ||.:.||  
Zfish   269 --------------------------------------------------------NTSKNRL-- 275

  Fly   650 SSCPNIYRNSMTTIAKEEEDTWYDNFVDTMKSIFDFSLFLDMKFALFNLSTLFLFIWFIIPYLYL 714
                                             .|.::..:..|..::...||..:.|..|.||:
Zfish   276 ---------------------------------LDLTVLKEGSFLCYSAFGLFATLGFFAPQLYV 307

  Fly   715 PDYMKQYKYDVSQSAELISDVGIAQTVGMIGLGYLGDLSWMN---------INICYSLCMLVCGA 770
            .:.......:..::|.::|.:.|::.:|.:.:|::     ||         :.||.||..||.  
Zfish   308 VELSASLGTERDKAAYMLSIMAISEIIGRLSIGWV-----MNCGCIRKIFVLLICVSLMCLVL-- 365

  Fly   771 SVFFMPLLITNYMGLMVMCVIFGFTFASSFSFTPSILV--SIVDLDDFTCAYGLVLLVQGVGMIA 833
             |.|  .::..:.||:|.||::||...:..|....:|.  .:|.:.....|.|:.:.:|....:|
Zfish   366 -VLF--TIVNGFWGLVVCCVLYGFLLGNITSTHIPMLAEDDVVGIQRMPLAVGVYVCIQSFAGLA 427

  Fly   834 GPPIAGVIYEYTGRWDDTFYYAGIFIALSGVCSYLI------EFCEKKAPKESDSDVLETKKA 890
            |||:.||:.:.|..:...||.....:.|..:...|:      ..|.::...|::|.|.:..||
Zfish   428 GPPLGGVLVDITQNYSAAFYSCAAGMGLGAIFLGLVRPAKTGHLCRRRNNGENNSAVEQVSKA 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chkNP_001163063.1 MFS 143..>315 CDD:119392 46/172 (27%)
MFS <685..869 CDD:119392 45/194 (23%)
slc16a6aNP_001243761.1 MFS 31..464 CDD:119392 118/738 (16%)
MFS_1 33..429 CDD:284993 107/701 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - otm25394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
44.010

Return to query results.
Submit another query.