DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment chk and zgc:165507

DIOPT Version :9

Sequence 1:NP_001163063.1 Gene:chk / 35578 FlyBaseID:FBgn0033095 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_001092889.1 Gene:zgc:165507 / 561188 ZFINID:ZDB-GENE-070620-11 Length:394 Species:Danio rerio


Alignment Length:713 Identity:142/713 - (19%)
Similarity:198/713 - (27%) Gaps:344/713 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 PDGGYGWVVVFASLVVSLIADGLSFSFGLINV----ELLEYFGESTSKTAWISSLFFSVPLLMGP 193
            ||||:||.||..    :.|:.|.|::|.....    ::...|..|.|:.|||||:..:|....||
Zfish    13 PDGGWGWAVVGG----AFISIGFSYAFPKATTVFFKDIQRIFNASYSQVAWISSIMLAVMYAGGP 73

  Fly   194 IWSNLVDKYGCRKMTILGGVVSAFGFALSSFCNSIEMLMVTFGIISGLGLGIGYVTAVVSIAFWF 258
            |.|.||:.||||.:.||||.:.|.|...:||||::..|.:..|:|.||||......|:..|..:|
Zfish    74 ISSILVNTYGCRPIMILGGFLCAIGMISASFCNNVLELYICIGVIGGLGLAFNLQPALTMIGRYF 138

  Fly   259 DKKRTFATGIGASGTGIGTFVYARLTSYLIESYGWRGATLILGGTMLNACVCGALMRDPDWLIEE 323
            .|||..|.|...:|:.:.....|.|..|||..|||||:.|||||.:||.||.|:|||        
Zfish   139 YKKRPIANGFAMAGSPVFLSTLAPLNQYLINEYGWRGSFLILGGLLLNCCVAGSLMR-------- 195

  Fly   324 NRLESRSQSVTTFSNSSVCLEEIKKLLDTGITKEAVLDSLVTKNNTEANQQIDDPLDSALKRYRS 388
                                                                  ||         
Zfish   196 ------------------------------------------------------PL--------- 197

  Fly   389 EIFLPTFLSTQELDSICEVKSLSRRSLRHKEGEEAPSRENLLSMSSGAGAYPPSTAVIGSPDDTL 453
                                             .||         :|:.|.||...|        
Zfish   198 ---------------------------------VAP---------AGSIAPPPVVEV-------- 212

  Fly   454 MGGIAHEAAEEAKKAYLASIETLSPSEKRSTGRTPNGSLRSSDEGYLTQKHASSRYSLNENIFMA 518
                                                             |||.            
Zfish   213 -------------------------------------------------KHAE------------ 216

  Fly   519 KHTTPSISNLKVNGLRHNSVDILSEDMHCYYSKDETFALLEPSRRIRPTVIAIPEQEQSVNSELA 583
                                                                             
Zfish   217 ----------------------------------------------------------------- 216

  Fly   584 TRRARLDSITGIRRLSRSKKPSHHRSNLRRNISIRNSNFLKDMRIHRNSIHYRGAMLNTHRYRLR 648
                                                                             
Zfish   217 ----------------------------------------------------------------- 216

  Fly   649 ASSCPNIYRNSMTTIAKEEEDTWYDNFVDTMKSIFDFSLFLDMKFALFNLSTLFLFIWFIIPYLY 713
                            ||:...|     .|:....|.|||....|.::....:.:|:.|..|.::
Zfish   217 ----------------KEKLTAW-----QTVNKYLDLSLFKHRGFLIYLSGNVIMFLGFFAPIVF 260

  Fly   714 LPDYMKQYKYDVSQSAELISDVGIAQTVGMIGLGYLGDLSWMNINICY--SLCMLVCGASVFFMP 776
            |..|.|....|..|:|.|:|.:..........:|.|.:..|:...|.|  |..:|..|......|
Zfish   261 LSPYAKDNGVDEYQAAFLLSILAFVDMFARPSMGLLANSRWVRPRIQYFFSFAVLYNGVCHLLCP 325

  Fly   777 LLITNYMGLMVMCVIFGFTFASSFSFTPSILVSIVDLDDFTCAYGLVLLVQGVGMIAGPPIAG 839
             |..:|.|::|..|.|||.|....:.....|:.:|....|:.|.||..:|:...::.|||:||
Zfish   326 -LAESYTGMVVYAVFFGFAFGMVSAVLFETLMDLVGAQRFSSAVGLTTIVECCPVLIGPPLAG 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chkNP_001163063.1 MFS 143..>315 CDD:119392 70/175 (40%)
MFS <685..869 CDD:119392 45/157 (29%)
zgc:165507NP_001092889.1 MFS 38..387 CDD:119392 128/682 (19%)
MFS_1 46..383 CDD:284993 125/670 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - otm25394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
66.010

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