DRSC/TRiP Functional Genomics Resources

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Protein Alignment chk and slc16a12b

DIOPT Version :9

Sequence 1:NP_001163063.1 Gene:chk / 35578 FlyBaseID:FBgn0033095 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_001139286.1 Gene:slc16a12b / 449947 ZFINID:ZDB-GENE-050522-80 Length:488 Species:Danio rerio


Alignment Length:771 Identity:162/771 - (21%)
Similarity:244/771 - (31%) Gaps:328/771 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 DSSSTEKKTPKM--PDGGYGWVVVFASLVVSLIADGLSFSFGLINVELLEYFGESTSKTAWISSL 183
            |..:.|||...:  ||||:||::|....||::....::....:..||...:|.:..|.||||.||
Zfish    10 DYMAQEKKKGGVLPPDGGWGWMIVAGCFVVTVCTRAVTRCISIFFVEFQMHFAKDYSGTAWIHSL 74

  Fly   184 FFSVPLLMGPIWSNLVDKYGCRKMTILGGVVSAFGFALSSFCNSIEMLMVTFGIISGLGLGIGYV 248
            .....:|..|:.|.:.::..||...||||.:::.|..||||..|:|.|..|.|:::|||..:.|.
Zfish    75 VDCTTMLCAPLGSLIGNQLSCRIAVILGGFLASVGLVLSSFATSLEYLYATLGLLTGLGFALCYT 139

  Fly   249 TAVVSIAFWFDKKRTFATGIGASGTGIGTFVYARLTSYLIESYGWRGATLILGGTMLNACVCGAL 313
            .|:..:..:|.:::..|.||..||:|||||:.|.:...|||.|.||||.|||||.:||.||||||
Zfish   140 PAIAMVGIYFCERKALAYGIAMSGSGIGTFILAPVVQLLIEHYSWRGALLILGGFVLNLCVCGAL 204

  Fly   314 MRDPDWLIEENRLESRSQSVTTFSNSSVCLEEIKKLLDTGITKEAVLDSLVTKNNTEANQQIDDP 378
            :| |..|.||                ..|                                   |
Zfish   205 LR-PIILKEE----------------EAC-----------------------------------P 217

  Fly   379 LDSALKRYRSEIFLPTFLSTQELDSICEVKSLSRRSLRHKEGEEAPSRENLLSMSSGAGAYPPST 443
            |                    .:||.|                             |....||  
Zfish   218 L--------------------PVDSEC-----------------------------GYSVKPP-- 231

  Fly   444 AVIGSPDDTLMGGIAHEAAEEAKKAYLASIETLSPSEKRSTGRTPNGSLRSSDEGYLTQKHASSR 508
                    ||.||....||.:||:                                         
Zfish   232 --------TLNGGPTRSAASDAKQ----------------------------------------- 247

  Fly   509 YSLNENIFMAKHTTPSISNLKVNGLRHNSVDILSEDMHCYYSKDETFALLEPSRRIRPTVIAIPE 573
                                                 .|:.|..|...||.|             
Zfish   248 -------------------------------------RCFQSMQEYHFLLMP------------- 262

  Fly   574 QEQSVNSELATRRARLDSITGIRRLSRSKKPSHHRSNLRRNISIRNSNFLKDMRIHRNSIHYRGA 638
                                                    :..:...:||               
Zfish   263 ----------------------------------------DFLVLAGSFL--------------- 272

  Fly   639 MLNTHRYRLRASSCPNIYRNSMTTIAKEEEDTWYDNFVDTMKSIFDFSLFLDMKFALFNLSTLFL 703
                    |.||.|.                                                  
Zfish   273 --------LLASGCS-------------------------------------------------- 279

  Fly   704 FIWFIIPYLYLPDYMKQYKYDVSQSAELISDVGIAQTVGMIGLGYLGDLSWMN--INICYSLCML 766
                 :|::||..|..........:|.|:|.:|:...||.|..|:|.|...:.  .||||...:.
Zfish   280 -----LPFVYLVPYALDVGVGHQHAAFLMSILGVIDIVGNITFGWLTDRRCLKKYRNICYMFAVG 339

  Fly   767 VCGASVFFMPLLITNYMGLMVMCVIFGFTFASSFSFTPSILVSIVDLDDFTCAYGLVLLVQGVGM 831
            :.|....|:|||.| ::.|:...|::|:...:..:..|.:...:|.....:.|.|:|..:..|..
Zfish   340 MEGLCCLFIPLLRT-FVWLVPFSVLYGYFDGAYVALIPVVTSDVVGRQYLSSALGVVYFLHAVPY 403

  Fly   832 IAGPPIAGVIYEYTGRWDDTFYYAGIFIALSGVCSY---LIEFCEKKAPKESDSDV 884
            :..|||.|.:.:.||.:..||:.:|..:..|.:..:   :|.:|::...|.|.|.:
Zfish   404 LVSPPIGGWLVDTTGTYTATFFLSGFALISSSLLLFSVAIIRYCQRNQKKNSLSKI 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chkNP_001163063.1 MFS 143..>315 CDD:119392 69/171 (40%)
MFS <685..869 CDD:119392 43/188 (23%)
slc16a12bNP_001139286.1 MFS 33..430 CDD:119392 146/717 (20%)
MFS_1 37..407 CDD:284993 136/690 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 139 1.000 Domainoid score I4741
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - otm25394
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.810

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