DRSC/TRiP Functional Genomics Resources

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Protein Alignment chk and slc16a1b

DIOPT Version :9

Sequence 1:NP_001163063.1 Gene:chk / 35578 FlyBaseID:FBgn0033095 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_956379.1 Gene:slc16a1b / 368274 ZFINID:ZDB-GENE-030515-5 Length:461 Species:Danio rerio


Alignment Length:777 Identity:146/777 - (18%)
Similarity:226/777 - (29%) Gaps:364/777 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 TPKMPDGGYGWVVVFASLVVSLIADGLSFSF-GLINV---ELLEYFGESTSKTAWISSLFFSVPL 189
            ||  |:||:||.||    |.:.|:.|.|::| ..|.|   |:...|..::|:.:||||:..:|..
Zfish    12 TP--PEGGWGWAVV----VGAFISIGFSYAFPKSITVFFKEIEVIFNATSSQVSWISSIMLAVMY 70

  Fly   190 LMGPIWSNLVDKYGCRKMTILGGVVSAFGFALSSFCNSIEMLMVTFGIISGLGLGIGYVTAVVSI 254
            ..|||.|.||:|:|.|.:.|.||.:|..|...:|||:::|.|....|:|.||||......|:..|
Zfish    71 AGGPISSILVNKFGSRPIMIAGGCLSGTGLVAASFCDTVEGLYFCVGVIGGLGLAFNLNPALTMI 135

  Fly   255 AFWFDKKRTFATGIGASGTGIGTFVYARLTSYLIESYGWRGATLILGGTMLNACVCGALMRDPDW 319
            ..:|.|:|..|.||..:|:.:.....|.|.|:|.:.:||||:.|||||.:||.||.|:|||    
Zfish   136 GKYFYKRRPIANGIAMAGSPVFLSTLAPLNSWLFDQFGWRGSFLILGGALLNCCVAGSLMR---- 196

  Fly   320 LIEENRLESRSQSVTTFSNSSVCLEEIKKLLDTGITKEAVLDSLVTKNNTEANQQIDDPLDSALK 384
                                                                      |:     
Zfish   197 ----------------------------------------------------------PI----- 198

  Fly   385 RYRSEIFLPTFLSTQELDSICEVKSLSRRSLRHKEGEEAPSRENLLSMSSGAGAYPPSTAVIGSP 449
                                                                |..|         
Zfish   199 ----------------------------------------------------GPKP--------- 202

  Fly   450 DDTLMGGIAHEAAEEAKKAYLASIETLSPSEKRSTGRTPNGSLRSSDEGYLTQKHASSRYSLNEN 514
                ...|..|.||            :.|.||::..:|.||.|                      
Zfish   203 ----QPAIPKEDAE------------IKPQEKKTVMQTINGFL---------------------- 229

  Fly   515 IFMAKHTTPSISNLKVNGLRHNSVDILSEDMHCYYSKDETFALLEPSRRIRPTVIAIPEQEQSVN 579
                                                                             
Zfish   230 ----------------------------------------------------------------- 229

  Fly   580 SELATRRARLDSITGIRRLSRSKKPSHHRSNLRRNISIRNSNFLKDMRIHRNSIHYRGAMLNTHR 644
                                                                             
Zfish   230 ----------------------------------------------------------------- 229

  Fly   645 YRLRASSCPNIYRNSMTTIAKEEEDTWYDNFVDTMKSIFDFSLFLDMKFALFNLSTLFLFIWFII 709
                                                   |.:||....|.|:.|..:.:|.....
Zfish   230 ---------------------------------------DLTLFTHRGFLLYLLGNVIMFFGLFA 255

  Fly   710 PYLYLPDYMKQYKYDVSQSAELISDVGIAQTVGMIGLGYLGDLSWMNINICY--SLCMLVCGASV 772
            |.::|.:|.|.......::|.|:|.:.....:....:|.:.:..|:...|.|  :..:|..|...
Zfish   256 PLVFLSNYAKSKHISKDKAAFLLSILAFTDMIARPSMGLVANTRWVRPRIQYFFAASVLYNGVCH 320

  Fly   773 FFMPLLITNYMGLMVMCVIFGFTFASSFSFTPSILVSIVDLDDFTCAYGLVLLVQGVGMIAGPPI 837
            ...| |.|:|:|..:..|.||..|....|.....|:.:|....|:.|.|||.:|:...::.|||:
Zfish   321 LLAP-LSTDYLGFAIYAVFFGVAFGWLSSVLFETLMDLVGAQRFSSAVGLVTIVECAPVLLGPPL 384

  Fly   838 AGVIYEYTGRWDDTFYYAGIFIALSGV-------CSYLIEFCEKKAPKESDSDVLETKKAQL 892
            .|.:.:....:..|:...||.:.::.:       .:|.:...|||.         |.|:|:|
Zfish   385 LGRLNDIYDDYKYTYQGCGIVLVIASIFLFVGMGINYRLVDKEKKE---------EEKRAKL 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chkNP_001163063.1 MFS 143..>315 CDD:119392 68/175 (39%)
MFS <685..869 CDD:119392 45/192 (23%)
slc16a1bNP_956379.1 2A0113 1..442 CDD:273325 146/777 (19%)
MFS 20..415 CDD:119392 132/734 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - otm25394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.910

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