DRSC/TRiP Functional Genomics Resources

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Protein Alignment chk and CG10019

DIOPT Version :9

Sequence 1:NP_001163063.1 Gene:chk / 35578 FlyBaseID:FBgn0033095 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_001368939.1 Gene:CG10019 / 33600 FlyBaseID:FBgn0031568 Length:1159 Species:Drosophila melanogaster


Alignment Length:428 Identity:94/428 - (21%)
Similarity:176/428 - (41%) Gaps:81/428 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 NNNHNGQNQSQNGG------ASNYQAL-PLTPAPANTPLHKAIKHD-LFPEVTFCNLSVEELADG 76
            ::....:|...|||      |:::.:| ..||.|:    |...:.| .||          .|||.
  Fly   361 HHQQRAKNLMANGGCYFGYEANHHPSLHATTPHPS----HITDEEDSAFP----------GLADR 411

  Fly    77 AGHSRVVRSSVIELEDGTMTCLMNGNGQVKRRKRLISNESGDSIDSSSTEKKTPKMPDGGYGWVV 141
            ..|                  |::.|....||         ..:|  :|..:....||||:||::
  Fly   412 EFH------------------LLHRNIPALRR---------TGVD--TTRIRQYFYPDGGWGWII 447

  Fly   142 VFASLVVSLIADGLSFSFGLINVELLEYFGESTSKTAWISSLFFSVPLLMGPIWSNLVDKYGCRK 206
            ...|.:|.::..||..|:||:....::|. .:||....:.:|.:||.::......:|..|...|.
  Fly   448 CGVSFLVHILTTGLQLSYGLLWFYAVQYL-HNTSGIELLGALSWSVSMVATSFVVSLCRKRSIRL 511

  Fly   207 MTILGGVVSAFGFALSSFCNSIEMLMVTFGIISGLGLGIGYVTAVVSIAFWFDKKRTFATGIGAS 271
            ::|:||:|...|...:||......::.::||:.|:|:.:....:.|.:..:|.::|.|...:..|
  Fly   512 LSIVGGLVMPLGILFTSFATEFGQVVFSYGIVFGVGVAMVREASTVMLGNYFKRRRQFVEMVAMS 576

  Fly   272 GTGIGTFVYARLTSYLIESYGWR-GATLILGGTMLNACVCGALMRDPDWLIEENRLESRSQSVTT 335
            |.|:|..:::.:....:...||| |..::...|.|:..:  .||..|..|....|     :::..
  Fly   577 GEGVGIALFSVILKEGVGKAGWRLGLQIVAALTALSFFM--GLMYRPASLYHPQR-----RAIQH 634

  Fly   336 FSNSSVCLEEIKKLLDTGI------------TKEAVLDSLVTKNNTEANQQIDDP-----LDSAL 383
            ..|....:.|.|.:|...:            :.::|...::...::.|:..|..|     |::|.
  Fly   635 LKNQRKKMREKKPILSQDVESTPKYFFLDISSLKSVTVKILLMTSSVASFGIYTPMFLMALNAAE 699

  Fly   384 K--RYRSEIFLPTFLSTQELDSICEVKSLSRRS--LRH 417
            :  ..:..:.|.|||.......:....:|.||.  :||
  Fly   700 QGSDVQELVLLQTFLGISMALGVVIAGALLRRCFVIRH 737

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chkNP_001163063.1 MFS 143..>315 CDD:119392 42/172 (24%)
MFS <685..869 CDD:119392
CG10019NP_001368939.1 MFS_MCT_SLC16 444..840 CDD:340910 67/302 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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