DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment chk and out

DIOPT Version :10

Sequence 1:NP_610230.3 Gene:chk / 35578 FlyBaseID:FBgn0033095 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_573378.1 Gene:out / 32926 FlyBaseID:FBgn0259834 Length:655 Species:Drosophila melanogaster


Alignment Length:783 Identity:152/783 - (19%)
Similarity:280/783 - (35%) Gaps:213/783 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 KRLISNESGDSIDSSSTEKKTPK------------MPDGGYGWVVVFASLVVSLIADGLSFSFGL 161
            |..::.::...:.:.:|:.|.||            .||||:||||..|:.:.:.........:||
  Fly     3 KSSLTEKNHTQVYNDTTKPKKPKRRDKSDLGPDFVAPDGGWGWVVCLAAGLNNFFLFPALQQYGL 67

  Fly   162 INVELLEYFGESTSKTAWISSLFFSVPLLMGPIWSNLVDKYGCRKMTILGGVVSAFGFALSSFCN 226
            |....::..|....:|..|.::..::..|:|.:...:..::..|::.:.|..::..|..||:||.
  Fly    68 IYRVRMQSLGFDAKQTTTIVNVVMAISSLVGIVNGAMFRRFTFRQVALTGTSLAFLGVFLSAFCT 132

  Fly   227 SIEMLMVTFGIISGLGLGIGYVTAVVSIAFWFDKKRTFATGIGASGTGIGTFVYARLTSYLIESY 291
            :....::....|.|:|||:......:::..:|..||..|||...:.||:|...:.::::.|:..|
  Fly   133 TFWQYIICLSAIFGIGLGLAMAATSLAVNTYFKLKRRRATGFSWTITGLGPIFFPQVSTVLLGYY 197

  Fly   292 GWRGATLILGGTMLNACVCGALMRDPDWLIEE------NRLESRSQSVTTFSNSSVCLEEIKKLL 350
            |.:|..||..|..:||.:|...::...|.:::      |.:|.              :.|.:|| 
  Fly   198 GAQGTILIYAGIAMNAILCALTLQPVLWHVKKPEKPVHNTIEG--------------IAETEKL- 247

  Fly   351 DTGITKEAVLDSLVTKNNTEANQQIDDPLDSALKRYRSEIFLPTFLSTQELDSICEVKSLSRRSL 415
                 :..:|         |||..:..|.:...|.|..:              .|:.:..|:|.|
  Fly   248 -----QPELL---------EANGNLLSPSNDPWKDYECK--------------YCQYQKRSKRGL 284

  Fly   416 ---RHKEGEEAPSRENLLSMSSGAGAYPPSTAVIGSPDDTLMGGIAHEAAEEAKKAYLASIETLS 477
               ::....:.|.|       .|.....|.|.::...:|...|                      
  Fly   285 FSSQYLFNVDDPER-------PGYEITEPGTPMLARANDGWFG---------------------- 320

  Fly   478 PSEKRSTGRTPNGSLRSSDEGYLTQKHASSRYSLNENIFMAKH----TTPSISNLKVNGLRHNSV 538
             |:...|..:..|:...:.:..:.|..:.||.:| :.:...:|    .|||.:.|    .:.|..
  Fly   321 -SKLSLTSESAGGARSRTRQALMRQVSSRSRENL-DRLEQNRHDQGPDTPSAAAL----YKPNYF 379

  Fly   539 DILSEDMHCYYSKDETFALLEPSRRIRPTVIAIPEQEQSVNSELATRRARLDSITGIRRLSRSKK 603
            :...||:..|.||...:     ||         |.|::.:....|..:|.|....          
  Fly   380 NREREDLDRYASKTSVY-----SR---------PGQDELLRCTCAEDKALLQKTA---------- 420

  Fly   604 PSHHRSNLRRNISIRNSNFLKDMRIHRNSIHYRGAMLNTHRYRLRASSCPNIYRNSMTTIAKEEE 668
                                :.:::                         |::.||......|||
  Fly   421 --------------------ESLQV-------------------------NLFNNSADNTEAEEE 440

  Fly   669 DTWYDNFVDTMKSIFDFSLFLD------------MKFALFNLSTLFLFIWFIIPYLYLPDYMKQY 721
            ......|...:...||..|..|            |.|...|.|.|..||            :..:
  Fly   441 AKRRMTFFQKVSKFFDLDLLRDFTFVNLAVGMSIMMFGEMNFSVLTPFI------------LNSF 493

  Fly   722 KYDVSQSAELISDVGIAQTVGMIGLGYLGDLSWMNI----NICYS---LCMLVCGASVFFMPLLI 779
            .|..:|.:.::|.:....    |.:.:|..|:...:    .:.::   ||:.|....|.|     
  Fly   494 GYTDTQISLVMSLLACMD----ISVRFLAPLALEKVKLDNRVLFAFGILCIAVGRVVVAF----- 549

  Fly   780 TNYMGLMV-MCVIFGFTFASSFSFTPSILVSIVDLDDFTCAYGLVLLVQGVGMIAGPPIAGVIYE 843
            |:...:|: :.::.||..|....|:|.|:.|.|.|:....|.||.|:...:...|..||.|::.|
  Fly   550 TDSYEIMIGVFLLIGFGKAFRTIFSPLIIPSYVPLNRLPAASGLQLIFNTIFSFAMGPILGILTE 614

  Fly   844 YTG 846
            ..|
  Fly   615 AYG 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chkNP_610230.3 MFS_MCT_SLC16 138..>315 CDD:340910 44/176 (25%)
MFS <687..869 CDD:475125 41/180 (23%)
outNP_573378.1 MFS 44..>221 CDD:475125 44/176 (25%)
MFS <459..626 CDD:475125 41/180 (23%)

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