DRSC/TRiP Functional Genomics Resources

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Protein Alignment chk and Slc16a4

DIOPT Version :9

Sequence 1:NP_001163063.1 Gene:chk / 35578 FlyBaseID:FBgn0033095 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_001013935.1 Gene:Slc16a4 / 295356 RGDID:1359655 Length:500 Species:Rattus norvegicus


Alignment Length:765 Identity:158/765 - (20%)
Similarity:258/765 - (33%) Gaps:286/765 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 EKKTP--KMPDGGYGWVVVFASLVVSLIADGLSFSFGLINVELLEYFGESTSKTAWISSLFFSVP 188
            ||.:|  |..|||:||:||....:|::...|::.:|.:..|...|.|..::.:..||.|:..|:.
  Rat     6 EKPSPYTKPLDGGWGWMVVLHFFLVNVFVMGMTKTFAIFFVVFQEEFEGTSEQIGWIGSIMSSLR 70

  Fly   189 LLMGPIWSNLVDKYGCRKMTILGGVVSAFGFALSSFCNSIEMLMVTFGIISGLGLGIGYVTAVVS 253
            ...||:.:.:.|.:|.:..:|||..:.:.|:.:||:...|..|.||.|::.|||....|..|.|.
  Rat    71 FSAGPLAAIICDIFGEKTTSILGTFLVSGGYLISSWATGIPFLCVTMGLLPGLGSAFLYQVAAVV 135

  Fly   254 IAFWFDKKRTFATGIGASGTGIGTFVYARLTSYLIESYGWRGATLILGGTMLNACVCGALMRDPD 318
            |..:|.|:...:|.|..||.|: ||:.|..|..||:.|.|.||.::.|...||......|:|.. 
  Rat   136 ITKYFKKRLGLSTAIARSGMGL-TFLLAPFTKLLIDLYDWTGALILFGAIALNLVPSSMLLRPV- 198

  Fly   319 WLIEENRLESRSQSVTTFSNSSVCLEEIKKLLDTGITKEAVLDSLVTKNNTEANQQIDDPLDSAL 383
                  .::|.|.|            :||       .|.::|                       
  Rat   199 ------HIQSDSNS------------DIK-------NKGSIL----------------------- 215

  Fly   384 KRYRSEIFLPTFLSTQELDSICEVKSLSRRSLRHKEGEEAPSR----ENLLSMSSGAGAYPPSTA 444
                                     |.:...|.||  .|.|:|    |:|:..|:...:..|:| 
  Rat   216 -------------------------SATGPELSHK--TETPNRNKAQESLIKDSAVKKSGQPTT- 252

  Fly   445 VIGSPDDTLMGGIAHEAAEEAKKAYLASIETLSPSEKRSTGRTPNGSLRSSDEGYLTQKHASSRY 509
                                          ||:..|                             
  Rat   253 ------------------------------TLTVLE----------------------------- 258

  Fly   510 SLNENIFMAKHTTPSISNLKVNGLRHNSVDILSEDMHCYYSKDETFALLEPSRRIRPTVIAIPEQ 574
                                      |.::                                   
  Rat   259 --------------------------NQIE----------------------------------- 262

  Fly   575 EQSVNSELATRRARLDSITGIRRLSRSKKPSHHRSNLRRNISIRNSNFLKDMRIHRNSIHYRGAM 639
                  |::||.                                          |||.       
  Rat   263 ------EISTRP------------------------------------------HRNR------- 272

  Fly   640 LNTHRYRLRASSCPNIYRNSMTTIAKEEEDTWYDNFVDTMKSIFDFSLFLDMKFALFNLSTLFLF 704
                         |.:..|..|  .|::..:|     :..:.:.|.|||.:..|.:|..|.|...
  Rat   273 -------------PLLMSNDKT--YKKKFVSW-----NCKEKLLDISLFRNPFFYIFTWSFLLSQ 317

  Fly   705 IWFIIPYLYLPDYMKQYKYDVSQSAELISDVGIAQTVGMIGLGYLGDLSWMNINICYSLCMLVCG 769
            :.:.||..:|....|....|:..::.|:|..||.:||..:..|::.|.:|:.....:...:::||
  Rat   318 LAYFIPTFHLVARAKTLGIDIMDASYLVSVAGITETVSQLISGWIADQNWIKKYQYHKAYLILCG 382

  Fly   770 ASVFFMPLLITNYMGLMVMCVIFGFTFASSFSFTPSILVSIVDLDDFTCAY---GLVLLVQGVGM 831
            .:....||..|  ..|::...||...||.  .:...||..:|||...:..:   |......|:.:
  Rat   383 VTNLLAPLATT--FPLLMAYTIFFAIFAG--GYLALILPVLVDLSKNSRVHRFLGYASFFAGMAV 443

  Fly   832 IAGPPIAGVIYEYTGRWDDTFYYAGIFIALSGVCSYLIEFCEKKAPKESD 881
            ::||||||.||:||..:..:||::|....||.|..:.:...|:...|:||
  Rat   444 LSGPPIAGWIYDYTQTYVGSFYFSGTCYILSSVSLFFVPLAERWKLKQSD 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chkNP_001163063.1 MFS 143..>315 CDD:119392 53/171 (31%)
MFS <685..869 CDD:119392 54/186 (29%)
Slc16a4NP_001013935.1 MFS_MCT5 20..486 CDD:340979 147/742 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - mtm12325
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.910

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