DRSC/TRiP Functional Genomics Resources

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Protein Alignment chk and Slc16a4

DIOPT Version :10

Sequence 1:NP_610230.3 Gene:chk / 35578 FlyBaseID:FBgn0033095 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_001013935.1 Gene:Slc16a4 / 295356 RGDID:1359655 Length:500 Species:Rattus norvegicus


Alignment Length:765 Identity:158/765 - (20%)
Similarity:258/765 - (33%) Gaps:286/765 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 EKKTP--KMPDGGYGWVVVFASLVVSLIADGLSFSFGLINVELLEYFGESTSKTAWISSLFFSVP 188
            ||.:|  |..|||:||:||....:|::...|::.:|.:..|...|.|..::.:..||.|:..|:.
  Rat     6 EKPSPYTKPLDGGWGWMVVLHFFLVNVFVMGMTKTFAIFFVVFQEEFEGTSEQIGWIGSIMSSLR 70

  Fly   189 LLMGPIWSNLVDKYGCRKMTILGGVVSAFGFALSSFCNSIEMLMVTFGIISGLGLGIGYVTAVVS 253
            ...||:.:.:.|.:|.:..:|||..:.:.|:.:||:...|..|.||.|::.|||....|..|.|.
  Rat    71 FSAGPLAAIICDIFGEKTTSILGTFLVSGGYLISSWATGIPFLCVTMGLLPGLGSAFLYQVAAVV 135

  Fly   254 IAFWFDKKRTFATGIGASGTGIGTFVYARLTSYLIESYGWRGATLILGGTMLNACVCGALMRDPD 318
            |..:|.|:...:|.|..||.|: ||:.|..|..||:.|.|.||.::.|...||......|:|.. 
  Rat   136 ITKYFKKRLGLSTAIARSGMGL-TFLLAPFTKLLIDLYDWTGALILFGAIALNLVPSSMLLRPV- 198

  Fly   319 WLIEENRLESRSQSVTTFSNSSVCLEEIKKLLDTGITKEAVLDSLVTKNNTEANQQIDDPLDSAL 383
                  .::|.|.|            :||       .|.::|                       
  Rat   199 ------HIQSDSNS------------DIK-------NKGSIL----------------------- 215

  Fly   384 KRYRSEIFLPTFLSTQELDSICEVKSLSRRSLRHKEGEEAPSR----ENLLSMSSGAGAYPPSTA 444
                                     |.:...|.||  .|.|:|    |:|:..|:...:..|:| 
  Rat   216 -------------------------SATGPELSHK--TETPNRNKAQESLIKDSAVKKSGQPTT- 252

  Fly   445 VIGSPDDTLMGGIAHEAAEEAKKAYLASIETLSPSEKRSTGRTPNGSLRSSDEGYLTQKHASSRY 509
                                          ||:..|                             
  Rat   253 ------------------------------TLTVLE----------------------------- 258

  Fly   510 SLNENIFMAKHTTPSISNLKVNGLRHNSVDILSEDMHCYYSKDETFALLEPSRRIRPTVIAIPEQ 574
                                      |.::                                   
  Rat   259 --------------------------NQIE----------------------------------- 262

  Fly   575 EQSVNSELATRRARLDSITGIRRLSRSKKPSHHRSNLRRNISIRNSNFLKDMRIHRNSIHYRGAM 639
                  |::||.                                          |||.       
  Rat   263 ------EISTRP------------------------------------------HRNR------- 272

  Fly   640 LNTHRYRLRASSCPNIYRNSMTTIAKEEEDTWYDNFVDTMKSIFDFSLFLDMKFALFNLSTLFLF 704
                         |.:..|..|  .|::..:|     :..:.:.|.|||.:..|.:|..|.|...
  Rat   273 -------------PLLMSNDKT--YKKKFVSW-----NCKEKLLDISLFRNPFFYIFTWSFLLSQ 317

  Fly   705 IWFIIPYLYLPDYMKQYKYDVSQSAELISDVGIAQTVGMIGLGYLGDLSWMNINICYSLCMLVCG 769
            :.:.||..:|....|....|:..::.|:|..||.:||..:..|::.|.:|:.....:...:::||
  Rat   318 LAYFIPTFHLVARAKTLGIDIMDASYLVSVAGITETVSQLISGWIADQNWIKKYQYHKAYLILCG 382

  Fly   770 ASVFFMPLLITNYMGLMVMCVIFGFTFASSFSFTPSILVSIVDLDDFTCAY---GLVLLVQGVGM 831
            .:....||..|  ..|::...||...||.  .:...||..:|||...:..:   |......|:.:
  Rat   383 VTNLLAPLATT--FPLLMAYTIFFAIFAG--GYLALILPVLVDLSKNSRVHRFLGYASFFAGMAV 443

  Fly   832 IAGPPIAGVIYEYTGRWDDTFYYAGIFIALSGVCSYLIEFCEKKAPKESD 881
            ::||||||.||:||..:..:||::|....||.|..:.:...|:...|:||
  Rat   444 LSGPPIAGWIYDYTQTYVGSFYFSGTCYILSSVSLFFVPLAERWKLKQSD 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chkNP_610230.3 MFS_MCT_SLC16 138..>315 CDD:340910 57/176 (32%)
MFS <687..869 CDD:475125 53/184 (29%)
Slc16a4NP_001013935.1 MFS_MCT5 20..486 CDD:340979 147/742 (20%)

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