DRSC/TRiP Functional Genomics Resources

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Protein Alignment chk and Slc16a13

DIOPT Version :9

Sequence 1:NP_001163063.1 Gene:chk / 35578 FlyBaseID:FBgn0033095 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_001005530.1 Gene:Slc16a13 / 287451 RGDID:1359138 Length:428 Species:Rattus norvegicus


Alignment Length:766 Identity:134/766 - (17%)
Similarity:228/766 - (29%) Gaps:362/766 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 PDGGYGWVVVFASLVVSLIADGLSFSFGLINVELLEYFGESTSKTAWISSLFFSVPLLMGPIWSN 197
            ||||:||:||.::...|.:..|:..|||:..||.:..|.|..::.:||:|:..:|.....||.|.
  Rat     8 PDGGWGWMVVLSAFFQSALVFGVLRSFGVFFVEFVAAFEEQAARVSWIASIGIAVQQFGSPIGSA 72

  Fly   198 LVDKYGCRKMTILGGVVSAFGFALSSFCNSIEMLMVTFGIISGLGLGIGYVTAVVSIAFWFDKKR 262
            |..|.|.|.:.:.||:::|.|..|:||..|:..|.::.|::||.|..:.:...:..::.:|.::|
  Rat    73 LSTKLGPRPVVMTGGILAALGMLLASFATSLTHLYLSIGLLSGSGWALTFTPTLACLSRYFSQRR 137

  Fly   263 TFATGIGASGTGIGTFVYARLTSYLIESYGWRGATLILGGTMLNACVCGALMRDPDWLIEENRLE 327
            :.|.|:..:|.||.:|.:|.|..:|:.:|.||||.|::....|:...||||:|            
  Rat   138 SLAMGLALTGVGISSFAFAPLFQWLLNNYAWRGALLLVSALSLHLVACGALLR------------ 190

  Fly   328 SRSQSVTTFSNSSVCLEEIKKLLDTGITKEAVLDSLVTKNNTEANQQIDDPLDSALKRYRSEIFL 392
                                                              ||             
  Rat   191 --------------------------------------------------PL------------- 192

  Fly   393 PTFLSTQELDSICEVKSLSRRSLRHKEGEEAPSRENLLSMSSGAGAYPPSTAVIGSPDDTLMGGI 457
                            ||:                                      :||.:|| 
  Rat   193 ----------------SLT--------------------------------------EDTAVGG- 202

  Fly   458 AHEAAEEAKKAYLASIETLSPSEKRSTGRTPNGSLRSSDEGYLTQKHASSRYSLNENIFMAKHTT 522
                                          |...:.|                            
  Rat   203 ------------------------------PWAQITS---------------------------- 209

  Fly   523 PSISNLKVNGLRHNSVDILSEDMHCYYSKDETFALLEPSRRIRPTVIAIPEQEQSVNSELATRRA 587
                                  :.|                                        
  Rat   210 ----------------------LLC---------------------------------------- 212

  Fly   588 RLDSITGIRRLSRSKKPSHHRSNLRRNISIRNSNFLKDMRIHRNSIHYRGAMLNTHRYRLRASSC 652
                               |...||..:::                    .::||          
  Rat   213 -------------------HGPFLRYTVAL--------------------TLINT---------- 228

  Fly   653 PNIYRNSMTTIAKEEEDTWYDNFVDTMKSIFDFSLFLDMKFALFNLSTLFLFIWFIIPYLYLPDY 717
                                                                 .:.|||::|..:
  Rat   229 -----------------------------------------------------GYFIPYVHLVAH 240

  Fly   718 MKQYKYDVSQSAELISDVGIAQTVGMIGLGYLGDLSWMNINICYSLCMLVCGASVFFMPLLITNY 782
            ::...:|...:|.|:|...|:..||.:..|:|||.....:.....|...:.|.|:...|:...: 
  Rat   241 LQDLGWDPLPAAFLLSVAAISDLVGRVASGWLGDAVPGPVARLLMLWTTLTGVSLALFPVAQAS- 304

  Fly   783 MGLMVMCVIFGFTFASSFSFTP---SILVSIVDLDDFTCAYGLVLLVQGVGMIAGPPIAGVIYEY 844
            ..|:|:.|.:|||   |.:.||   |::..:|......|..|||.:::.||.:.|.|::|.:.:.
  Rat   305 TTLVVLAVAYGFT---SGALTPVAFSVIPELVGTGRIYCGLGLVQMIESVGGLLGAPLSGYLRDV 366

  Fly   845 TGRWDDTFYYAGIF-IALSGVCSYLIEF--CEKKAPKESDSDVLETKKAQL 892
            ||.:..:|..||.| :|.|||...|..|  |...:.......|:|....::
  Rat   367 TGNYTASFVVAGAFLLAGSGVLITLPHFFSCISLSTSRPQDLVIEAPDTKI 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chkNP_001163063.1 MFS 143..>315 CDD:119392 55/171 (32%)
MFS <685..869 CDD:119392 49/187 (26%)
Slc16a13NP_001005530.1 MFS_MCT11_13 13..392 CDD:340981 125/734 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - mtm12325
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X70
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.910

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