DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment chk and mct-3

DIOPT Version :9

Sequence 1:NP_001163063.1 Gene:chk / 35578 FlyBaseID:FBgn0033095 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_510308.1 Gene:mct-3 / 181497 WormBaseID:WBGene00010834 Length:596 Species:Caenorhabditis elegans


Alignment Length:796 Identity:185/796 - (23%)
Similarity:302/796 - (37%) Gaps:256/796 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 DSSSTEKKTPKM-----PDGGYGWVVVFASLVVSLIADGLSFSFG-LINVELLEYFGESTSKTAW 179
            |..:.||:....     |||||||.:|.||.::::|.||:.|:.| ::....:..||.|.:..|.
 Worm    17 DPETVEKELEDAGFIAPPDGGYGWAIVAASFLLNMIVDGVIFTVGKILQPAWVHSFGISEASAAM 81

  Fly   180 ISSLFFSVPLLMGPIWSNLVDKYGCRKMTILGGVVSAFGFALSSFCNSIEMLMVTFGIISGLGLG 244
            ..|:........|||.|.|.:.:|||::.:.|.:::|.||.||....:|.:|.|:||:|:|.|.|
 Worm    82 TMSILSGCYFFAGPIASVLCNVFGCRQVALAGSLIAALGFLLSISAPNIYVLYVSFGLIAGAGFG 146

  Fly   245 IGYVTAVVSIAFWFDKKRTFATGIGASGTGIGTFVYARLTSYLIESYG--WR-----GATLILGG 302
            :.|:.|:|.|:.:|.|||:.||||...|:||||.|:|.|...:.:..|  |:     .|.:.:.|
 Worm   147 MMYLPAIVIISQYFAKKRSVATGIAVCGSGIGTTVFALLNDVVWDFVGGDWKQFLVYTAAVTISG 211

  Fly   303 TMLNACVCGALMR--DPDWLIEENRLESRSQSVTTFSNSSVCLEEIKKLL-DTGITKEAVLDS-L 363
              |.||:   |:|  .|          |:.|           :|::.|:| |....||.|.:| |
 Worm   212 --LGACI---LLRPLKP----------SKDQ-----------IEKVAKVLEDYEEHKEKVPESPL 250

  Fly   364 VTKNNTEANQQIDDPLDSALKRYRSEIFLPTFLSTQELDSICEVKSLSRRSLRHKEGEEAPSREN 428
            ::|:||                        .|||:.||                           
 Worm   251 LSKHNT------------------------PFLSSLEL--------------------------- 264

  Fly   429 LLSMSSGAGAYPPSTAVIGSPDDTLMGGIAHEAAEEAKKAYLASIETLSPSEKRSTGRTPNGSLR 493
                                          |.|                       |:..||   
 Worm   265 ------------------------------HTA-----------------------GKLENG--- 273

  Fly   494 SSDEGYLTQKHASSRYSLNENIFMAKHTTPSISNLKVNGLRHNSVDILSEDMHCYYSKDETFALL 558
                                      |.|.||.::         ||.:|:::             
 Worm   274 --------------------------HHTGSIKSI---------VDAVSKEI------------- 290

  Fly   559 EPSRRIRPTVIAIPEQEQSVNSELATRRARLD-----SITGIRRLSRSKKPSHHRSNLRRNISIR 618
                             :.:|..|    .|.|     |.|.|...||:       ..:.|     
 Worm   291 -----------------EDLNKPL----LRKDIFYSGSTTNIAARSRT-------GTMTR----- 322

  Fly   619 NSNFLKDMRIHRNSIHYRGAMLNTHRYRLRASSCPNIYRNSMTTIAKEEEDTWYDNFVDTMKSIF 683
                 ::...|:.|:.:||.:....:|..:|..  |...|....||.|.:   .......:|.:.
 Worm   323 -----EEAAEHQQSLRFRGKVETPQQYLSKADL--NAGDNGDVAIANESK---IQEIKQALKQLV 377

  Fly   684 DFSLFLDMKFALFNLSTLFLFIWFIIPYLYLPDYMKQYK-YDVSQSAELISDVGIAQTVGMIGLG 747
            |..|.....|.|...|.......|.:|::||.:::.:.: ...::.:..:|.:|:...|..||.|
 Worm   378 DKELLFSPSFLLLAFSGTLTLCCFYVPFIYLGNHLDKIEGLTTAEKSFTVSLIGVLNIVARIGCG 442

  Fly   748 YLGD---LSWMNINICYSLCMLVCGASVFFMPLLITNYMGLMVMCVIFGFTFASSFSFTPSILVS 809
            .|.|   :|.:.:|   :..::..|.:...:| |.|.|...:..||.|....|...:....|:|.
 Worm   443 ILADRPEVSALAVN---NFALIAAGLATMTVP-LYTAYWQFLAFCVPFSIGVACFAALRSIIVVE 503

  Fly   810 IVDLDDFTCAYGLVLLVQGVGMIAGPPIAGVIYEYTGRWDDTFYYAGIFIALSGVCSYLIEFCEK 874
            ::.|:..:.|:|::|...|||.:.|.|:|..:.:|||.:|.:||..|..:.:||.....:....|
 Worm   504 LIGLEKLSNAFGILLTFMGVGAVVGSPLAAAMKDYTGNFDTSFYVMGALMTISGAMCIPLGGLRK 568

  Fly   875 KAPKESDSDVLETKKA 890
            :....|||.  :.|||
 Worm   569 RELARSDSS--DAKKA 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chkNP_001163063.1 MFS 143..>315 CDD:119392 63/179 (35%)
MFS <685..869 CDD:119392 48/187 (26%)
mct-3NP_510308.1 MFS_MCT_SLC16 39..563 CDD:340910 170/751 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4139
SonicParanoid 1 1.000 - - X70
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.840

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