DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment chk and mct-4

DIOPT Version :9

Sequence 1:NP_001163063.1 Gene:chk / 35578 FlyBaseID:FBgn0033095 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_001041267.1 Gene:mct-4 / 180766 WormBaseID:WBGene00003986 Length:777 Species:Caenorhabditis elegans


Alignment Length:918 Identity:213/918 - (23%)
Similarity:357/918 - (38%) Gaps:258/918 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 NGGASNYQALPLTPAPANTPLHKAIKHDLFPEVTFCNLSVEELADGAGHSRVVRSSVIELEDGTM 95
            :|...|..:.|.:|.       |::|.:...|..|     ||.....|          .|.||.:
 Worm     3 DGPDPNRSSQPTSPT-------KSLKSERNGESNF-----EEDDQDIG----------SLNDGQL 45

  Fly    96 TCLMNGNGQVKRRKRLISNESGDSIDSSSTEKK---TPKMPDGGYGWVVVFASLVVSLIADGLSF 157
            |   |.:.|.             ||:....:.:   .|:.||||||||:|||:.:.:|:.||:|.
 Worm    46 T---NYSSQY-------------SINMGVQQVEPLLVPQAPDGGYGWVIVFAAFMSNLVVDGIST 94

  Fly   158 SFGLINVELLEYFGESTSKTAWISSLFFSVPLLMGPIWSNLVDKYGCRKMTILGGVVSAFGFALS 222
            :|........|.:.||...|.:|.||.....||:||:.|.|.:||..|.:.:.||::|...|.::
 Worm    95 AFSEFKQSYKERYQESDGLTVFIGSLIIGTYLLVGPLVSALCNKYEQRYVVMAGGLISGIAFMIA 159

  Fly   223 SFCNSIEMLMVTFGIISGLGLGIGYVTAVVSIAFWFDKKRTFATGIGASGTGIGTFVYARLTSYL 287
            ....:|.:.|:.:|::.|||.|:.|:.|:|.:.|:||.||..||||..:|:|:|||:...:....
 Worm   160 PASPNIYVFMLIYGVMGGLGFGMIYLPAIVVVGFYFDSKRAMATGISVAGSGVGTFLVPLICQVC 224

  Fly   288 IESYGWRGATLILGGTMLNACVCGALMRDPDWLIEENRLESRSQSVTTFSNSSVCLEEIKKLLDT 352
            |.:.||:....:| ..|:.:||....:..|..:::.|  |.|.|.:                   
 Worm   225 IANLGWQKTIWVL-AVMIFSCVFYGYLYRPLPMVDLN--EIRDQEM------------------- 267

  Fly   353 GITKEAVLDSLVTKNNTEANQQIDDPLDSALKRYRSEIFLPTFLSTQELDSICEVKSLSRRSLRH 417
                                    :||..||.:...:                           .
 Worm   268 ------------------------EPLRQALSKVEDD---------------------------E 281

  Fly   418 KEGEEAPSRENLLSMSSGAGAYPPSTAVIGSPDDTLMGGIAHEAAEEAKKAYLASIETLSPSEKR 482
            .|..|:|......|.:|||   ....||..:|:...:..|..|..|                   
 Worm   282 DEAVESPHPNRSTSAASGA---IEDEAVSQNPEVQRLRSILTEGDE------------------- 324

  Fly   483 STGRTPNGSLRSSDEGYLTQKHASSRYSLNENIFMAKHTTPSISNLKVNGLRHNSVDILSEDMHC 547
                   ||.....:.:..:.|.::|        ..|||..|.|     |.:|:           
 Worm   325 -------GSETPKSDAHKVRSHTATR--------SRKHTMTSNS-----GSQHD----------- 358

  Fly   548 YYSKDETFALLEPSRRIRPTVIAIPEQEQSVNSELATRRARLDSITGIRRLSRSKKPSHHRSNLR 612
                                 :.:.....|.::.|:...|| |....:.:||:|...|       
 Worm   359 ---------------------LKLSRGNLSSDNRLSRVSAR-DFNQSLSKLSKSGGAS------- 394

  Fly   613 RNISIRNS-----NFLKDMRIHRNSIHYRGAMLNTHRYRLRASSCPNIYRNSMTTIAK------- 665
             |:||..|     .|.:.|  :|..|.|.|::.|...::...:...  ||.|..:|.:       
 Worm   395 -NLSIAMSGVDPKEFQRPM--NRQDIFYGGSIQNLKEFKEEGTMAG--YRASTLSIPRSVVGQAV 454

  Fly   666 ------------------EEEDTWYDNFVD-------------TMKSIFDFSLFLDMKFALFNLS 699
                              |:|:...:.|||             .:..:.|.:|..:....:..:|
 Worm   455 SQLNLSRTGSRLGGPGIAEDEEEMIEPFVDDGCCKVLPLPMRNALSEMIDLNLLKNKTMMILCIS 519

  Fly   700 TLFLFIWFIIPYLYLPDYMKQYKYDVSQSAELISDVGIAQTVGMIGLGYLGD---LSWMNINICY 761
            .|...:.|.||.::|.|..:..|.|:|.:..|:...|:..|:|.:..|:|.|   ||.:.||   
 Worm   520 NLLGMMGFYIPIMFLKDLSESMKLDMSLAMFLVPIFGVFNTIGRVFFGWLTDQKILSALTIN--- 581

  Fly   762 SLCMLVCGASVFFMPLLITNYMGLMVMCVIFGFTFASSFSFTPSILVSIVDLDDFTCAYGLVLLV 826
            :|.::|.|......||| |:..|.....::|||..::....|..:|..::.|::.|.::||:::.
 Worm   582 NLSLIVSGLLTLACPLL-TSIAGQYFYAIVFGFIISAYICLTSIVLADLMGLENLTNSFGLLVVA 645

  Fly   827 QGVGMIAGPPIAGVIYEYTGRWDDTFYYAGIFIALSGVCSYLIEFCEKK-------APKESDSDV 884
            :|:..:.|||.||::|:.||.:|..||:.|:.:.::|:.|..|.|..||       .|:..|.|.
 Worm   646 RGIASLVGPPFAGIVYDITGSYDTAFYFGGLVLLVAGLISATIPFVTKKDADTADGMPQLQDQDN 710

  Fly   885 LETKKAQL 892
            :..|.:.|
 Worm   711 VSGKLSVL 718

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chkNP_001163063.1 MFS 143..>315 CDD:119392 58/171 (34%)
MFS <685..869 CDD:119392 54/186 (29%)
mct-4NP_001041267.1 MFS_MCT_SLC16 75..>252 CDD:340910 62/177 (35%)
MFS_MCT_SLC16 <507..689 CDD:340910 54/185 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4139
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.040

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