DRSC/TRiP Functional Genomics Resources

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Protein Alignment chk and slc16a1a

DIOPT Version :10

Sequence 1:NP_610230.3 Gene:chk / 35578 FlyBaseID:FBgn0033095 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_001243569.1 Gene:slc16a1a / 100534752 ZFINID:ZDB-GENE-110408-16 Length:461 Species:Danio rerio


Alignment Length:773 Identity:140/773 - (18%)
Similarity:228/773 - (29%) Gaps:360/773 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 TPKMPDGGYGWVVVFASLVVSLIADGLSFSF-GLINV---ELLEYFGESTSKTAWISSLFFSVPL 189
            ||  |:||:||.||..    :.|:.|.|::| ..|.|   |:...|..::|:.:||||:..:|..
Zfish    12 TP--PEGGWGWAVVLG----AFISIGFSYAFPKSITVFFKEIEVIFNATSSQVSWISSIMLAVMY 70

  Fly   190 LMGPIWSNLVDKYGCRKMTILGGVVSAFGFALSSFCNSIEMLMVTFGIISGLGLGIGYVTAVVSI 254
            ..||:.|.||:|||.|.:.||||.:|..|...:||||::|.|....|::.||||......|:..|
Zfish    71 GGGPVSSILVNKYGSRPIMILGGCLSGAGLIAASFCNTVEGLYFCVGVVGGLGLAFNLNPALTMI 135

  Fly   255 AFWFDKKRTFATGIGASGTGIGTFVYARLTSYLIESYGWRGATLILGGTMLNACVCGALMRDPDW 319
            ..:|.|||..|.||..:|:.:.....|.|.::..:.:||||:.|||||.:||.||.|:|||    
Zfish   136 GKYFYKKRPIANGIAMAGSPVFLSTLAPLNTWFFDQFGWRGSFLILGGLLLNCCVAGSLMR---- 196

  Fly   320 LIEENRLESRSQSVTTFSNSSVCLEEIKKLLDTGITKEAVLDSLVTKNNTEANQQIDDPLDSALK 384
                                                                             
Zfish   197 ----------------------------------------------------------------- 196

  Fly   385 RYRSEIFLPTFLSTQELDSICEVKSLSRRSLRHKEGEEAPSRENLLSMSSGAGAYPPSTAVIGSP 449
                                                                             
Zfish   197 ----------------------------------------------------------------- 196

  Fly   450 DDTLMGGIAHEAAEEAKKAYLASIETLSPSEKRSTGRTPNGSLRSSDEGYLTQKHASSRYSLNEN 514
                                                  |.|                        
Zfish   197 --------------------------------------PIG------------------------ 199

  Fly   515 IFMAKHTTPSISNLKVNGLRHNSVDILSEDMHCYYSKDETFALLEPSRRIRPTVIAIPEQEQSVN 579
                                                                     |:.:.:|.
Zfish   200 ---------------------------------------------------------PKPQPAVK 207

  Fly   580 SELATRRARLDSITGIRRLSRSKKPSHHRSNLRRNISIRNSNFLKDMRIHRNSIHYRGAMLNTHR 644
            ::                                     |||                       
Zfish   208 AD-------------------------------------NSN----------------------- 212

  Fly   645 YRLRASSCPNIYRNSMTTIAKEEEDTWYDNFVDTMKSIFDFSLFLDMKFALFNLSTLFLFIWFII 709
                             :.|||.:     ..|:.:....|.:||....|.|:.|..:.:|.....
Zfish   213 -----------------SRAKERK-----TVVEVINGFIDLTLFKHRGFLLYLLGNVVMFFGLFS 255

  Fly   710 PYLYLPDYMKQYKYDVSQSAELISDVGIAQTVGMIGLGYLGDLSWM--NINICYSLCMLVCGASV 772
            |.::|.:|.|..:....::|.|:|.:.....|....:|.:.:..|:  .:...::..:|:.|...
Zfish   256 PLVFLSNYAKSKQIPREKAAFLLSILAFVDMVARPSMGIVANTKWVRPRVQHFFAASILLNGVCH 320

  Fly   773 FFMPLLITNYMGLMVMCVIFGFTFASSFSFTPSILVSIVDLDDFTCAYGLVLLVQGVGMIAGPPI 837
            ...| |.|:|.|.::..:.|||.|....|.....|:.:|....|:.|.|||.:|:...::.|||:
Zfish   321 LLAP-LSTDYTGFVIYAIFFGFAFGWLSSVLFETLMDLVGAQRFSSAVGLVTIVECGPVLLGPPL 384

  Fly   838 AGVIYEYTGRWDDTFYYAGIFIALSGVCSYL-----IEFCEKKAPKESDSDVLETKKA 890
            .|...:....:..|:...||.:.:..:..::     .:..|::|.:||       |||
Zfish   385 LGKFNDIYHDYKYTYMGCGIVLLIGSLFLFVGMGINYKLLEREAKEES-------KKA 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chkNP_610230.3 MFS_MCT_SLC16 138..>315 CDD:340910 71/180 (39%)
MFS <687..869 CDD:475125 43/188 (23%)
slc16a1aNP_001243569.1 MFS_MCT1 19..417 CDD:340984 128/737 (17%)

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