DRSC/TRiP Functional Genomics Resources

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Protein Alignment chk and slc16a1a

DIOPT Version :9

Sequence 1:NP_001163063.1 Gene:chk / 35578 FlyBaseID:FBgn0033095 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_001243569.1 Gene:slc16a1a / 100534752 ZFINID:ZDB-GENE-110408-16 Length:461 Species:Danio rerio


Alignment Length:773 Identity:140/773 - (18%)
Similarity:228/773 - (29%) Gaps:360/773 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 TPKMPDGGYGWVVVFASLVVSLIADGLSFSF-GLINV---ELLEYFGESTSKTAWISSLFFSVPL 189
            ||  |:||:||.||..    :.|:.|.|::| ..|.|   |:...|..::|:.:||||:..:|..
Zfish    12 TP--PEGGWGWAVVLG----AFISIGFSYAFPKSITVFFKEIEVIFNATSSQVSWISSIMLAVMY 70

  Fly   190 LMGPIWSNLVDKYGCRKMTILGGVVSAFGFALSSFCNSIEMLMVTFGIISGLGLGIGYVTAVVSI 254
            ..||:.|.||:|||.|.:.||||.:|..|...:||||::|.|....|::.||||......|:..|
Zfish    71 GGGPVSSILVNKYGSRPIMILGGCLSGAGLIAASFCNTVEGLYFCVGVVGGLGLAFNLNPALTMI 135

  Fly   255 AFWFDKKRTFATGIGASGTGIGTFVYARLTSYLIESYGWRGATLILGGTMLNACVCGALMRDPDW 319
            ..:|.|||..|.||..:|:.:.....|.|.::..:.:||||:.|||||.:||.||.|:|||    
Zfish   136 GKYFYKKRPIANGIAMAGSPVFLSTLAPLNTWFFDQFGWRGSFLILGGLLLNCCVAGSLMR---- 196

  Fly   320 LIEENRLESRSQSVTTFSNSSVCLEEIKKLLDTGITKEAVLDSLVTKNNTEANQQIDDPLDSALK 384
                                                                             
Zfish   197 ----------------------------------------------------------------- 196

  Fly   385 RYRSEIFLPTFLSTQELDSICEVKSLSRRSLRHKEGEEAPSRENLLSMSSGAGAYPPSTAVIGSP 449
                                                                             
Zfish   197 ----------------------------------------------------------------- 196

  Fly   450 DDTLMGGIAHEAAEEAKKAYLASIETLSPSEKRSTGRTPNGSLRSSDEGYLTQKHASSRYSLNEN 514
                                                  |.|                        
Zfish   197 --------------------------------------PIG------------------------ 199

  Fly   515 IFMAKHTTPSISNLKVNGLRHNSVDILSEDMHCYYSKDETFALLEPSRRIRPTVIAIPEQEQSVN 579
                                                                     |:.:.:|.
Zfish   200 ---------------------------------------------------------PKPQPAVK 207

  Fly   580 SELATRRARLDSITGIRRLSRSKKPSHHRSNLRRNISIRNSNFLKDMRIHRNSIHYRGAMLNTHR 644
            ::                                     |||                       
Zfish   208 AD-------------------------------------NSN----------------------- 212

  Fly   645 YRLRASSCPNIYRNSMTTIAKEEEDTWYDNFVDTMKSIFDFSLFLDMKFALFNLSTLFLFIWFII 709
                             :.|||.:     ..|:.:....|.:||....|.|:.|..:.:|.....
Zfish   213 -----------------SRAKERK-----TVVEVINGFIDLTLFKHRGFLLYLLGNVVMFFGLFS 255

  Fly   710 PYLYLPDYMKQYKYDVSQSAELISDVGIAQTVGMIGLGYLGDLSWM--NINICYSLCMLVCGASV 772
            |.::|.:|.|..:....::|.|:|.:.....|....:|.:.:..|:  .:...::..:|:.|...
Zfish   256 PLVFLSNYAKSKQIPREKAAFLLSILAFVDMVARPSMGIVANTKWVRPRVQHFFAASILLNGVCH 320

  Fly   773 FFMPLLITNYMGLMVMCVIFGFTFASSFSFTPSILVSIVDLDDFTCAYGLVLLVQGVGMIAGPPI 837
            ...| |.|:|.|.::..:.|||.|....|.....|:.:|....|:.|.|||.:|:...::.|||:
Zfish   321 LLAP-LSTDYTGFVIYAIFFGFAFGWLSSVLFETLMDLVGAQRFSSAVGLVTIVECGPVLLGPPL 384

  Fly   838 AGVIYEYTGRWDDTFYYAGIFIALSGVCSYL-----IEFCEKKAPKESDSDVLETKKA 890
            .|...:....:..|:...||.:.:..:..::     .:..|::|.:||       |||
Zfish   385 LGKFNDIYHDYKYTYMGCGIVLLIGSLFLFVGMGINYKLLEREAKEES-------KKA 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chkNP_001163063.1 MFS 143..>315 CDD:119392 67/175 (38%)
MFS <685..869 CDD:119392 43/190 (23%)
slc16a1aNP_001243569.1 2A0113 6..446 CDD:273325 140/773 (18%)
MFS 20..415 CDD:119392 127/734 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - otm25394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.910

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