DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment chk and slc16a9

DIOPT Version :9

Sequence 1:NP_001163063.1 Gene:chk / 35578 FlyBaseID:FBgn0033095 Length:894 Species:Drosophila melanogaster
Sequence 2:XP_031761913.1 Gene:slc16a9 / 100485780 XenbaseID:XB-GENE-961458 Length:495 Species:Xenopus tropicalis


Alignment Length:758 Identity:173/758 - (22%)
Similarity:245/758 - (32%) Gaps:291/758 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 KMPDGGYGWVVVFASLVVSLIADGLSFSFGLINVELLEYFGESTSKTAWISSLFFSVPLLMGPIW 195
            |.||||:|||:|.:|..:..::.|...:.|::.||.|:.|.|...|||||.||...|.||..|:.
 Frog     5 KPPDGGWGWVIVVSSFFIQFLSYGSPLAVGVLYVEWLDTFEEGKGKTAWIGSLASGVGLLASPLC 69

  Fly   196 SNLVDKYGCRKMTILGGVVSAFGFALSSFCNSIEMLMVTFGIISGLGLGIGYVTAVVSIAFWFDK 260
            |..|..:|.|.:.|..|::.|.|..||||..|:..|..::|.:.|.|.|:.|...|.|...:|||
 Frog    70 SASVSAFGVRPVVIFSGLLVAGGLILSSFAPSLYFLFFSYGCMVGFGCGLSYPATVTSTCQYFDK 134

  Fly   261 KRTFATGIGASGTGIGTFVYARLTSYLIESYGWRGATLILGGTMLNACVCGALMRDPDWLIEENR 325
            :|..|.||.::|..|||||||.|...||..||..|..||:|...||...||.|||          
 Frog   135 RRGLALGIVSTGASIGTFVYASLQKVLIAIYGLDGCLLIIGALSLNILACGILMR---------- 189

  Fly   326 LESRSQSVTTFSNSSVCLEEIKKLLDTGITKEAVLDSLVTKNNTEANQQIDDPLDSALKRYRSEI 390
                                                                ||..|        
 Frog   190 ----------------------------------------------------PLPQA-------- 194

  Fly   391 FLPTFLSTQELDSICEVKSLSRRSLRHKEGEEAPSRENLLSMSSGAGAYPPSTAVIGSPDDTLMG 455
                                           .:||               |...::....||.: 
 Frog   195 -------------------------------SSPS---------------PEQTILDKTADTYL- 212

  Fly   456 GIAHEAAEEAKKAYLASIETLSPSEKRSTGRTPNGSLRSSDEGYLTQKHASSRYSLNENIFMAKH 520
             |.||...:..:|. ..:..:|.||   |.||.:  |.|:..|.:..|                 
 Frog   213 -IYHENEPDPDEAQ-GMLGIISGSE---TDRTDD--LSSTQNGLVAPK----------------- 253

  Fly   521 TTPSISNLKVNGLRHNSVDILSEDMHCYYSKDETFALLEPSRRIRPTVIAIPEQEQSVNSELATR 585
              ||:                                                          ||
 Frog   254 --PSV----------------------------------------------------------TR 258

  Fly   586 RARLDSITGIRRLSRSKKPSHHRSNLRRNISIRNSNFLKDMRIHRNSIHYRGAMLNTHRYRLRAS 650
            .                               |..||.|.:           ...|..||.....
 Frog   259 E-------------------------------REKNFCKQI-----------MKTNYQRYLTYWL 281

  Fly   651 SCPNIYRNSMTTIAKEEEDTWYDNFVDTMKSIFDFSLFLDMKFALFNLSTLFLFIWFII----PY 711
            ....::||.:.|                               |||     |..:.|.|    ..
 Frog   282 ETLELFRNRVFT-------------------------------ALF-----FAILLFDIGGFPAA 310

  Fly   712 LYLPDYMKQYKY-DVSQSAELISDVGIAQTVGMIGLGYLGDLSWMNINICYSLCMLVCGASVFFM 775
            |.|.|..|.... |.|....|:|.:|.:..:|.:.||.|.|..|||....|...::..|.::|.:
 Frog   311 LLLEDVAKSANIPDTSMVVPLVSILGFSTAMGKLMLGILADFKWMNTLYLYCFTLVATGLTLFAI 375

  Fly   776 PLLITNYMGLMVMCVIFGFTFASSFSFTPSILVSIVDLDDFTCAYGLVLLVQGVGMIAGPPIAGV 840
            |...| |..|.::..|.||. :.::|..|.:....|.||..|.|||:::...|:|...|||:.|.
 Frog   376 PYANT-YAVLALLAGIIGFA-SGNWSIFPYVTTKTVGLDKLTHAYGILMFFAGLGNCLGPPLVGW 438

  Fly   841 IYEYTGRWDDTFYYAGIFIALSGVCSYLIEF-----CEKKAPK 878
            .::.|..:...|..:.|.:.|.|:...::..     |..|:||
 Frog   439 CFDVTQTYKLAFLLSAICVILGGLILLIVSLPLWDNCTPKSPK 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chkNP_001163063.1 MFS 143..>315 CDD:119392 69/171 (40%)
MFS <685..869 CDD:119392 53/188 (28%)
slc16a9XP_031761913.1 MFS 12..468 CDD:421695 164/736 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - mtm14090
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

Return to query results.
Submit another query.