DRSC/TRiP Functional Genomics Resources

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Protein Alignment chk and slc16a5

DIOPT Version :9

Sequence 1:NP_001163063.1 Gene:chk / 35578 FlyBaseID:FBgn0033095 Length:894 Species:Drosophila melanogaster
Sequence 2:XP_002940018.3 Gene:slc16a5 / 100485544 XenbaseID:XB-GENE-1008043 Length:455 Species:Xenopus tropicalis


Alignment Length:765 Identity:134/765 - (17%)
Similarity:232/765 - (30%) Gaps:365/765 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 PDGGYGWVVVFASLVVSLIADGLSFSF----GLINVELLEYFGESTSKTAWISSLFFSVPLLMGP 193
            |||.:.|||    |...::..|||..|    |:...::...|..|.::|:|..|:..:|....||
 Frog     4 PDGPWAWVV----LAAVMLTQGLSLGFPSCIGIFYTDIQTSFQASNTETSWFPSIIMAVLHAGGP 64

  Fly   194 IWSNLVDKYGCRKMTILGGVVSAFGFALSSFCNSIEMLMVTFGIISGLGLGIGYVTAVVSIAFWF 258
            :.:.:|:::|||...::||::...|...|:|..:|..|.::.|.:.|||....:...:..:.::|
 Frog    65 LCTIMVERFGCRVTVMVGGLLCGVGMVTSAFSQTIIHLYLSAGFVGGLGFCFCFQAGITVLGYYF 129

  Fly   259 DKKRTFATGIGASGTGIGTFVYARLTSYLIESYGWRGATLILGGTMLNACVCGALMRDPDWLIEE 323
            .::||.|..:.::|..||..::...:.:|:|:.||||:.|:.||.:||.|||||:||        
 Frog   130 IRRRTLANSLASAGASIGMALWPLASQHLLETMGWRGSFLLFGGVLLNCCVCGAIMR-------- 186

  Fly   324 NRLESRSQSVTTFSNSSVCLEEIKKLLDTGITKEAVLDSLVTKNNTEANQQIDDPLDSALKRYRS 388
                                                                             
 Frog   187 ----------------------------------------------------------------- 186

  Fly   389 EIFLPTFLSTQELDSICEVKSLSRRSLRHKEGEEAPSRENLLSMSSGAGAYPPSTAVIGSPDDTL 453
                             .|:||..                                         
 Frog   187 -----------------PVRSLEP----------------------------------------- 193

  Fly   454 MGGIAHEAAEEAKKAYLASIETLSPSEKRSTGRTPNGSLRSSDEGYLTQKHASSRYSLNENIFMA 518
                |||.            |.|:|.|.                                     
 Frog   194 ----AHEK------------EVLAPEEP------------------------------------- 205

  Fly   519 KHTTPSISNLKVNGLRHNSVDILSEDMHCYYSKDETFALLEPSRRIRPTVIAIPEQEQSVNSELA 583
                        ||::|..              ::|                  ||.:.:...:|
 Frog   206 ------------NGIKHKG--------------EKT------------------EQGKGLQRYMA 226

  Fly   584 TRRARLDSITGIRRLSRSKKPSHHRSNLRRNISIRNSNFLKDMRIHRNSIHYRGAMLNTHRYRLR 648
                                                                             
 Frog   227 ----------------------------------------------------------------- 226

  Fly   649 ASSCPNIYRNSMTTIAKEEEDTWYDNFVDTMKSIFDFSLFLDMKFALFNLSTLFLFIWFIIPYLY 713
                                              ||. ||...::.::.|...::.:.|::|..|
 Frog   227 ----------------------------------FDL-LFRHRRYQIYALGVTWMVLGFVLPLFY 256

  Fly   714 LPDYMKQYKYDVSQSAELISDVG-----IAQTVGMIG--------LGYLGDLSWMNINICYSLCM 765
            |..|......|..::|.|:|.||     :....|::.        |.||..::    .|...|..
 Frog   257 LVPYATSNDIDEKKAALLLSLVGFMNIFMRPMAGLVSQQKVFHGRLMYLFSVA----VILNGLSN 317

  Fly   766 LVCGASVFFMPLLITNYMGLMVMCVIFGFTFASSFSFTPSILVSIVDLDDFTCAYGLVLLVQGVG 830
            |||...|.| |.|:|       .||::..|.:...|....:|:..|.:..|..|:||..:::.:.
 Frog   318 LVCAIWVSF-PALLT-------YCVLYSITMSFIGSLIFQVLMDTVGMKRFPGAFGLFTILESIT 374

  Fly   831 MIAGPPIAGVIYEYTGRWDDTFYYAGIFIALS----GVCSYLIEFCEKKA 876
            ::||||:||::.:.||::...||.:.|.:..|    |:.|:.::..|.||
 Frog   375 IMAGPPLAGLLVDITGQYGLVFYASSIAVTSSGLFMGLASFAVDRSEAKA 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chkNP_001163063.1 MFS 143..>315 CDD:119392 52/175 (30%)
MFS <685..869 CDD:119392 52/200 (26%)
slc16a5XP_002940018.3 MFS_MCT6 9..414 CDD:340983 127/748 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - mtm14090
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

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